RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 PCDH1Q08174 1060 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 SLBPQ14493 270 aaKnown RBP eCLIP10.95□□□□□ -0.66
LINC00562-201ENST00000566385 NFATC4Q14934 902 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 FAM174BQ3ZCQ3 159 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 ZNF542PQ5EBM4 170 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 RABL3Q5HYI8 236 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 RNF111Q6ZNA4 994 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 DEFB119Q8N690 84 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 ENDOVQ8N8Q3 282 aaKnown RBP10.95□□□□□ -0.66
LINC00562-201ENST00000566385 OR13H1Q8NG92 308 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 LRRC58Q96CX6 371 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 MSANTD3Q96H12 275 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 TRIT1Q9H3H1 467 aaKnown RBP10.95□□□□□ -0.66
LINC00562-201ENST00000566385 SPATA6Q9NWH7 488 aaPredicted RBP10.95□□□□□ -0.66
LINC00562-201ENST00000566385 CUEDC1Q9NWM3 386 aaPredicted RBP10.95□□□□□ -0.66
LINC00562-201ENST00000566385 TMEM181Q9P2C4 612 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 EIF3LQ9Y262 564 aaKnown RBP10.95□□□□□ -0.66
LINC00562-201ENST00000566385 INVSQ9Y283 1065 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 FAM170BA6NMN3 283 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 NME4O00746 187 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 DNAJA2O60884 412 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 C1GALT1C1LP0DN25 315 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 JAK1P23458 1154 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 SLC6A2P23975 617 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 RPS13P62277 151 aaKnown RBP10.95□□□□□ -0.66
LINC00562-201ENST00000566385 PHC1P78364 1004 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 SPANXN4Q5MJ08 99 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 PRAMEF14Q5SWL7 426 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 PRAMEF13Q5VWM6 474 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 SLC30A9Q6PML9 568 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 Q6ZSR6 202 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 SFTPA2Q8IWL1 248 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 KIAA2013Q8IYS2 634 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 TBC1D21Q8IYX1 336 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 SIX5Q8N196 739 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 PCYOX1LQ8NBM8 494 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 SLC26A7Q8TE54 656 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 SLC5A11Q8WWX8 675 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 TMEM74Q96NL1 305 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 TCEAL2Q9H3H9 227 aaPredicted RBP10.95□□□□□ -0.66
LINC00562-201ENST00000566385 RMI1Q9H9A7 625 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 SPAG4Q9NPE6 437 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 WSB2Q9NYS7 404 aaPredicted RBP10.95□□□□□ -0.66
LINC00562-201ENST00000566385 VPS29Q9UBQ0 182 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 PCDHGA11Q9Y5H2 935 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 ABCA7Q8IZY2 2146 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 PIPSLA2A3N6 862 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 BBIP1A8MTZ0 92 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 SAP18O00422 153 aaKnown RBP10.94□□□□□ -0.66
LINC00562-201ENST00000566385 ACOT8O14734 319 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 PI15O43692 258 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 EEDO75530 441 aaKnown RBP10.94□□□□□ -0.66
LINC00562-201ENST00000566385 TGFB1P01137 390 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 GBAP04062 536 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 IDSP22304 550 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 ME2P23368 584 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 SOX11P35716 441 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 CCDC6Q16204 474 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 UAP1L1Q3KQV9 507 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 ATG9BQ674R7 924 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 NOXRED1Q6NXP6 359 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 NXPE4Q6UWF7 544 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 SLC15A3Q8IY34 581 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 DENND6BQ8NEG7 585 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 STMN2Q93045 179 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 ROPN1LQ96C74 230 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 C11orf24Q96F05 449 aaPredicted RBP10.94□□□□□ -0.66
LINC00562-201ENST00000566385 CMTM7Q96FZ5 175 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 WDR92Q96MX6 357 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 CAMK1GQ96NX5 476 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 OR2M4Q96R27 311 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 DPY30Q9C005 99 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 LTB4R2Q9NPC1 389 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 CMTM6Q9NX76 183 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 NDE1Q9NXR1 346 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 GPRC5BQ9NZH0 403 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 CD300AQ9UGN4 299 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 KLF15Q9UIH9 416 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 DYRK1BQ9Y463 629 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 CHURC1-FNTBB4DL54 471 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 PRPH2P23942 346 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 KIAA1024LP59773 190 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 MAD2L1Q13257 205 aaPredicted RBP10.94□□□□□ -0.66
LINC00562-201ENST00000566385 NFYCQ13952 458 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 RPE65Q16518 533 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 ALG11Q2TAA5 492 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 C6orf163Q5TEZ5 329 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 CACHD1Q5VU97 1274 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 MED27Q6P2C8 311 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 HACD2Q6Y1H2 254 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 GPR156Q8NFN8 814 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 NRG4Q8WWG1 115 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 SERPINI1Q99574 410 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 TACO1Q9BSH4 297 aaKnown RBP10.94□□□□□ -0.66
LINC00562-201ENST00000566385 PRM3Q9NNZ6 103 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 PPT2Q9UMR5 302 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 USP22Q9UPT9 525 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 NEUROG3Q9Y4Z2 214 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 LRP4O75096 1905 aa10.94□□□□□ -0.66
LINC00562-201ENST00000566385 FEZF1A0PJY2 475 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms