RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CASTOR1Q8WTX7 329 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 SOCS4Q8WXH5 440 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 KIAA1191Q96A73 305 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 NUDT9Q9BW91 350 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 MEAF6Q9HAF1 191 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 ACOT13Q9NPJ3 140 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 RNF215Q9Y6U7 377 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 PTPRJQ12913 1337 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 PRSS44E7EML9 344 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 F5H0A9 414 aaPredicted RBP2.85□□□□□ -1.95
CHD9-218ENST00000566029 ENSAO43768 121 aaKnown RBP2.85□□□□□ -1.95
CHD9-218ENST00000566029 TPOP07202 933 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 ANXA6P08133 673 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 CTSHP09668 335 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 CXCR4P61073 352 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 DYNLT1P63172 113 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 ABRQ12979 859 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 CBFBQ13951 182 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 PTGES3Q15185 160 aaKnown RBP2.85□□□□□ -1.95
CHD9-218ENST00000566029 C19orf48Q6RUI8 117 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 GPALPP1Q8IXQ4 340 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 GATAD2BQ8WXI9 593 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 TFAP2BQ92481 460 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 SGTBQ96EQ0 304 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 WDFY2Q96P53 400 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 CYP2S1Q96SQ9 504 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 NUSAP1Q9BXS6 441 aaKnown RBP2.85□□□□□ -1.95
CHD9-218ENST00000566029 SLC6A17Q9H1V8 727 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 ARFGEF2Q9Y6D5 1785 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 OOEPA6NGQ2 149 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 SLC1A7O00341 560 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 RAB7AP51149 207 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 CLDN10P78369 228 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 TGM3Q08188 693 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 SSX1Q16384 188 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 ESRP1Q6NXG1 681 aaKnown RBP2.85□□□□□ -1.95
CHD9-218ENST00000566029 RANBP10Q6VN20 620 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 C16orf59Q7L2K0 433 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 RDH10Q8IZV5 341 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 VANGL1Q8TAA9 524 aaPredicted RBP2.85□□□□□ -1.95
CHD9-218ENST00000566029 INTS12Q96CB8 462 aaKnown RBP2.85□□□□□ -1.95
CHD9-218ENST00000566029 RIT2Q99578 217 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 APOL4Q9BPW4 351 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 TMED9Q9BVK6 235 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 FAM105AQ9NUU6 356 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 NUDT5Q9UKK9 219 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 RAB23Q9ULC3 237 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 GINS2Q9Y248 185 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 WWP2O00308 870 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SGCEO43556 437 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 GDF11O95390 407 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PSMB9P28065 219 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 CA5AP35218 305 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MATKP42679 507 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 LHFPL2Q6ZUX7 228 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 AMIGO1Q86WK6 493 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MPP5Q8N3R9 675 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 TSPEARQ8WU66 669 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 RRNAD1Q96FB5 475 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 ZC3HAV1LQ96H79 300 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 ASB7Q9H672 318 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 NMRAL1Q9HBL8 299 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SMURF1Q9HCE7 757 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PTTG3PQ9NZH4 202 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 NARFQ9UHQ1 456 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 ZDHHC2Q9UIJ5 367 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 TMX2Q9Y320 296 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 TRPM3Q9HCF6 1732 aaPredicted RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 ZCWPW2A0A1B0GU75 182 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 WRBO00258 174 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 APOC1P02654 83 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 LRG1P02750 347 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 LCKP06239 509 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 RB1P06400 928 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 EFNA1P20827 205 aaPredicted RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 TYK2P29597 1187 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 OAZ1P54368 228 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 DENND1BQ6P3S1 775 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PGAP1Q75T13 922 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SV2AQ7L0J3 742 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 OR2L8Q8NGY9 312 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 HTATIP2Q9BUP3 242 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SPATA9Q9BWV2 254 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 UCK2Q9BZX2 261 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PITHD1Q9GZP4 211 aaPredicted RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 LDAHQ9H6V9 325 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 NMUR1Q9HB89 426 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 SEPSECSQ9HD40 501 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 EXOSC4Q9NPD3 245 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 IFT46Q9NQC8 304 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 C1orf112Q9NSG2 853 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 KCNK7Q9Y2U2 307 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 MED16Q9Y2X0 877 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 TNPO3Q9Y5L0 923 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 MYO1GB0I1T2 1018 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PTGES3LE9PB15 166 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 PLA2G10O15496 165 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 CPNE3O75131 537 aaKnown RBP2.84□□□□□ -1.95
CHD9-218ENST00000566029 NR3C2P08235 984 aa2.84□□□□□ -1.95
CHD9-218ENST00000566029 S100GP29377 79 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms