RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 CTNNA1P35221 906 aaKnown RBP8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 DLX5P56178 289 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 RWDD2BP57060 319 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 TAS2R40P59535 323 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 OC90Q02509 493 aaPredicted RBP8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 MMRN1Q13201 1228 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 TFDP2Q14188 446 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 MAPKAPK3Q16644 382 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 GALNTL5Q7Z4T8 443 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 REXO1L1PQ8IX06 675 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 BEST3Q8N1M1 668 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 FLVCR1-AS1Q8TAF5 88 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 LRRN4Q8WUT4 740 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 HEXDCQ8WVB3 486 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 SLC22A18Q96BI1 424 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 IMMP1LQ96LU5 166 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 ZNF830Q96NB3 372 aaPredicted RBP8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 SIGLEC12Q96PQ1 595 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 SELENOSQ9BQE4 189 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 SARGQ9BW04 601 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 SLC6A16Q9GZN6 736 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 VPS37BQ9H9H4 285 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 LZTFL1Q9NQ48 299 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 ENAMQ9NRM1 1142 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 BEX4Q9NWD9 120 aaPredicted RBP8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 HACD3Q9P035 362 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 TFR2Q9UP52 801 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 HRH3Q9Y5N1 445 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 PCM1Q15154 2024 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 IGLV3-12A0A075B6K2 115 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 LOC102723996A0A087X1L8 192 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 CFAP99D6REC4 459 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 CDK2AP1O14519 115 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 PRPF4O43172 522 aaKnown RBP eCLIP8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 GPR39O43194 453 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 PRMT3O60678 531 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 ZNF189O75820 626 aaPredicted RBP8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 IFNA2P01563 188 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 ATP1B2P14415 290 aaPredicted RBP8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 TCF4P15884 667 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 FBLP22087 321 aaKnown RBP8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 MCM3P25205 808 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 PDHA2P29803 388 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 PTGER1P34995 402 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 GRIA3P42263 894 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 ZFP36L2P47974 494 aaKnown RBP8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 NR2C2P49116 596 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 IFI35P80217 286 aaPredicted RBP8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 DPYSL3Q14195 570 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 SLC14A2Q15849 920 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 TAZQ16635 292 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 WASHC2DQ5SRD0 308 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 NCBP2-AS2Q69YL0 99 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 H3F3CQ6NXT2 135 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 FIGLAQ6QHK4 219 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 C16orf47Q6ZP98 133 aaPredicted RBP8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 ARHGEF18Q6ZSZ5 1173 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 P3H2Q8IVL5 708 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 PHC2Q8IXK0 858 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 POGLUT1Q8NBL1 392 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 ARMC2Q8NEN0 867 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 FAM222BQ8WU58 562 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 METTL21AQ8WXB1 218 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 ZUFSPQ96AP4 578 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 FAF2Q96CS3 445 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 TRIM44Q96DX7 344 aaPredicted RBP8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 HES6Q96HZ4 224 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 SEC16BQ96JE7 1060 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 COX4I2Q96KJ9 171 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 RNF157Q96PX1 679 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 HES7Q9BYE0 225 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 ASB8Q9H765 288 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 COG4Q9H9E3 785 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 ANKRD10Q9NXR5 420 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 GNPTGQ9UJJ9 305 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 KLHL20Q9Y2M5 609 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 TDRKHQ9Y2W6 561 aaKnown RBP8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 JRKLQ9Y4A0 524 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 MXRA5Q9NR99 2828 aa8.57□□□□□ -1.04
VPS9D1-205ENST00000565452 LRRD1A4D1F6 860 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 H7C1Q1 480 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 STX7O15400 261 aaKnown RBP8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 SGTAO43765 313 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 KIF5CO60282 957 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 EPOP01588 193 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 TUBB4AP04350 444 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 GSTM1P09488 218 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 MAGP20916 626 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 PTPN7P35236 360 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 PRLHRP49683 370 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 NUP107P57740 925 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 VSX2P58304 361 aaPredicted RBP8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 GSTM4Q03013 218 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 FASTKQ14296 549 aaKnown RBP8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 DAZAP2Q15038 168 aaPredicted RBP8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 PCBP2Q15366 365 aaKnown RBP eCLIP8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 RPS6KA1Q15418 735 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 MUM1Q2TAK8 710 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 MEI1Q5TIA1 1274 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms