RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 MASP2O00187 686 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 CNOT3O75175 753 aaKnown RBP13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 PDGFAP04085 211 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 OR1D4P47884 311 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 ARSFP54793 590 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 WASHC2DQ5SRD0 308 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 CAPN12Q6ZSI9 719 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 OR4N4Q8N0Y3 316 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 GPATCH11Q8N954 259 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 TEX19Q8NA77 164 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 HMGCLL1Q8TB92 370 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 ADAMTS17Q8TE56 1095 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 ZNF480Q8WV37 535 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 ZUFSPQ96AP4 578 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 C17orf62Q9BQA9 187 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 EPN3Q9H201 632 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 IGSF5Q9NSI5 407 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 COMMD10Q9Y6G5 202 aa13.05□□□□□ -0.32
VPS9D1-204ENST00000565023 A0A1B0GX78 115 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 ESPNB1AK53 854 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 MYO1CO00159 1063 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 DSCR3O14972 297 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 ZBTB14O43829 449 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 WISP1O95388 367 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 SLC16A8O95907 504 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 AHSGP02765 367 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 STATHP02808 62 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 ENO3P13929 434 aaPredicted RBP13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 SAT1P21673 171 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 GABRB3P28472 473 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 MAGEA4P43358 317 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 CDKN2DP55273 166 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 MGAT5Q09328 741 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 GRM7Q14831 915 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 TCTE1Q5JU00 501 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 ICE2Q659A1 982 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 TCTN3Q6NUS6 607 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 UGT3A1Q6NUS8 523 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 PAQR3Q6TCH7 311 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 CYHR1Q6ZMK1 362 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 MBOAT1Q6ZNC8 495 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 NEK10Q6ZWH5 1172 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 CYS1Q717R9 158 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 PLD3Q8IV08 490 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 APLFQ8IW19 511 aaPredicted RBP13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 PALM2Q8IXS6 379 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 PRSS58Q8IYP2 241 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 EEF1AKMT1Q8WVE0 214 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 DHRS4Q9BTZ2 278 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 SOX17Q9H6I2 414 aaPredicted RBP13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 SLC22A11Q9NSA0 550 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 KLHL42Q9P2K6 505 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 ADAMTS6Q9UKP5 1117 aa13.04□□□□□ -0.32
VPS9D1-204ENST00000565023 HYKKA2RU49 373 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 ZNF839A8K0R7 811 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 TARM1B6A8C7 271 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 ALOX12BO75342 701 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 KLF7O75840 302 aaPredicted RBP13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 FKBP9O95302 570 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 MED26O95402 600 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 GSTA2P09210 222 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 ERGP11308 486 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 ITGAXP20702 1163 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 SSTR1P30872 391 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 RGS4P49798 205 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 PGDP52209 483 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 KCNC4Q03721 635 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 KLRB1Q12918 225 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 PDAP1Q13442 181 aaKnown RBP13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 IGFBP7Q16270 282 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 RNF44Q7L0R7 432 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 MRGPREQ86SM8 312 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 CCDC25Q86WR0 208 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 MYO1HQ8N1T3 1032 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 LRRN4CLQ8ND94 238 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 ASB11Q8WXH4 323 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 LINGO1Q96FE5 620 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 CABS1Q96KC9 395 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 ZFYVE21Q9BQ24 234 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 YIPF2Q9BWQ6 316 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 CUEDC1Q9NWM3 386 aaPredicted RBP13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 TAS2R13Q9NYV9 303 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 ANAPC2Q9UJX6 822 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 NUP210LQ5VU65 1888 aa13.03□□□□□ -0.32
VPS9D1-204ENST00000565023 SCN3AQ9NY46 2000 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 OR2A25A4D2G3 310 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 E7ENX8 843 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 H0YGG7 62 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 PEX12O00623 359 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 FFAR3O14843 346 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 GPR42O15529 346 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 SRPX2O60687 465 aaPredicted RBP13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 CCNDBP1O95273 360 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 C1QAP02745 245 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 IMPA1P29218 277 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 ECHS1P30084 290 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 CASRP41180 1078 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 RRADP55042 308 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 GPX6P59796 221 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 ARF3P61204 181 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms