RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 TUBA3EQ6PEY2 450 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 DRICH1Q6PGQ1 229 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 CHST9Q7L1S5 443 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 AMIGO2Q86SJ2 522 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 ZNF440Q8IYI8 595 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 MMP21Q8N119 569 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 DTWD1Q8N5C7 304 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 OR52B6Q8NGF0 335 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 HCAR2Q8TDS4 363 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 MRGPRX2Q96LB1 330 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 ZNF578Q96N58 590 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 LRRC3BQ96PB8 259 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 NPY6RQ99463 290 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CCM2Q9BSQ5 444 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 GBA3Q9H227 469 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 LHX5Q9H2C1 402 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 MYNNQ9NPC7 610 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 GPR83Q9NYM4 423 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 ADA2Q9NZK5 511 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 VPS28Q9UK41 221 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SNX6Q9UNH7 406 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 RALGAPA2Q2PPJ7 1873 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 ANKRD12Q6UB98 2062 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 ZNF879B4DU55 563 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 ALOX15BO15296 676 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 HOXD8P13378 290 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 EPHB3P54753 998 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 GPAT3Q53EU6 434 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 RNF111Q6ZNA4 994 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 GALNT7Q86SF2 657 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 KBTBD6Q86V97 674 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SLAIN1Q8ND83 568 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 KBTBD8Q8NFY9 601 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 DNAJB14Q8TBM8 379 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 PTERQ96BW5 349 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 RIPOR3Q96MK2 946 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 LRMDAQ9H2I8 198 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 INTS10Q9NVR2 710 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 CCDC59Q9P031 241 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 EPHA6Q9UF33 1036 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 TRMT6Q9UJA5 497 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 PPM1HQ9ULR3 514 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 FNDC1Q4ZHG4 1894 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 BTBD17A6NE02 478 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 OR2W5A6NFC9 320 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 HAS3O00219 553 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 RGS14O43566 566 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 RPLP0P05388 317 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 C2P06681 752 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 HEXAP06865 529 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SBK3P0C264 359 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SLC19A1P41440 591 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 PTPN9P43378 593 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 DLX2Q07687 328 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 MZT2BQ6NZ67 158 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SERPINA13PQ6UXR4 307 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 GPR141Q7Z602 305 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 PLD3Q8IV08 490 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 OR4K2Q8NGD2 314 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 UCN3Q969E3 161 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CXorf40BQ96DE9 158 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 FEM1AQ9BSK4 669 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CINPQ9BW66 212 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 GPN1Q9HCN4 374 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 SUCOQ9UBS9 1254 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 DOLKQ9UPQ8 538 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 PADI2Q9Y2J8 665 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 THSD7BQ9C0I4 1608 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SCN3AQ9NY46 2000 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 GABRDO14764 452 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SERPINA1P01009 418 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 GNAZP19086 355 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 GRIA2P42262 883 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 SLC6A11P48066 632 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 INCA1Q0VD86 236 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 GRB7Q14451 532 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 OR4D1Q15615 310 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 ARL13AQ5H913 290 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 ZMAT1Q5H9K5 638 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 ZYG11AQ6WRX3 759 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 QSOX2Q6ZRP7 698 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 RASSF6Q6ZTQ3 369 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 TMEM151AQ8N4L1 468 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CKAP2Q8WWK9 683 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 PGM2Q96G03 612 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 EGFL8Q99944 293 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 TBCDQ9BTW9 1192 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CADM1Q9BY67 442 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 FBXO10Q9UK96 956 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 MYO9BQ13459 2157 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 NYNRINQ9P2P1 1898 aaKnown RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 MGAT4DA6NG13 374 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 TTC34A8MYJ7 566 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 E7ENX8 843 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 DVL1O14640 695 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 TLX3O43711 291 aaPredicted RBP3.27□□□□□ -1.89
CHD9-213ENST00000564845 ULK1O75385 1050 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 CYC1P08574 325 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 GRIA4P48058 902 aa3.27□□□□□ -1.89
CHD9-213ENST00000564845 NUDT2P50583 147 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms