RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 NTRK1P04629 796 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 KLK3P07288 261 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-208ENST00000564703 SLCO1A2P46721 670 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 GLRBP48167 497 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 IRF9Q00978 393 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 NAA30Q147X3 362 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-208ENST00000564703 TCTE1Q5JU00 501 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 C6orf15Q6UXA7 325 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-208ENST00000564703 THOC6Q86W42 341 aaKnown RBP15.34■□□□□ 0.05
RAB40C-208ENST00000564703 CENPLQ8N0S6 344 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-208ENST00000564703 NLGN4XQ8N0W4 816 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 TBC1D19Q8N5T2 526 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 NLGN4YQ8NFZ3 816 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-208ENST00000564703 OR1L3Q8NH93 324 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 ISL2Q96A47 359 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 PRAP1Q96NZ9 151 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 ZFYVE21Q9BQ24 234 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 SELENOSQ9BQE4 189 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 CAPS2Q9BXY5 557 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 NUDT4Q9NZJ9 180 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 PADI1Q9ULC6 663 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 SLC22A14Q9Y267 594 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 SPEGQ15772 3267 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 AKAP13Q12802 2813 aa15.34■□□□□ 0.05
RAB40C-208ENST00000564703 OR2A25A4D2G3 310 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.33■□□□□ 0.04
RAB40C-208ENST00000564703 TAF4O00268 1085 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 CPNE3O75131 537 aaKnown RBP15.33■□□□□ 0.04
RAB40C-208ENST00000564703 CDH16O75309 829 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 H2AFYO75367 372 aaKnown RBP15.33■□□□□ 0.04
RAB40C-208ENST00000564703 STK16O75716 305 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 IPO13O94829 963 aaKnown RBP15.33■□□□□ 0.04
RAB40C-208ENST00000564703 WDR47O94967 919 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 GMPRP36959 345 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 MAGEA12P43365 314 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 KCNC1P48547 511 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 CSRP3P50461 194 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 YBX1P67809 324 aaKnown RBP15.33■□□□□ 0.04
RAB40C-208ENST00000564703 ST3GAL2Q16842 350 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 DEFB110Q30KQ9 67 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 FBXO42Q6P3S6 717 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 TDRPQ86YL5 185 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 CACNA2D3Q8IZS8 1091 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 ESX1Q8N693 406 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 ACMSDQ8TDX5 336 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 RERGQ96A58 199 aaPredicted RBP15.33■□□□□ 0.04
RAB40C-208ENST00000564703 NDC1Q9BTX1 674 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 ROPN1BQ9BZX4 212 aaPredicted RBP15.33■□□□□ 0.04
RAB40C-208ENST00000564703 SPRTNQ9H040 489 aaPredicted RBP15.33■□□□□ 0.04
RAB40C-208ENST00000564703 ACTR5Q9H9F9 607 aaPredicted RBP15.33■□□□□ 0.04
RAB40C-208ENST00000564703 ROPN1Q9HAT0 212 aaPredicted RBP15.33■□□□□ 0.04
RAB40C-208ENST00000564703 SLC6A20Q9NP91 592 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 PILRAQ9UKJ1 303 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 TMEM184BQ9Y519 407 aaPredicted RBP15.33■□□□□ 0.04
RAB40C-208ENST00000564703 PCDHB3Q9Y5E6 796 aa15.33■□□□□ 0.04
RAB40C-208ENST00000564703 ACACBO00763 2458 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 TXNDC9O14530 226 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 ZNF749O43361 778 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 RAD1O60671 282 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 RFPL1O75677 317 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 EIF2S1P05198 315 aaKnown RBP15.32■□□□□ 0.04
RAB40C-208ENST00000564703 NUDT17P0C025 328 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 GFAPP14136 432 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 EZRP15311 586 aaKnown RBP15.32■□□□□ 0.04
RAB40C-208ENST00000564703 GNAZP19086 355 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 GGT5P36269 586 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 CCR8P51685 355 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 ARSFP54793 590 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 VSX2P58304 361 aaPredicted RBP15.32■□□□□ 0.04
RAB40C-208ENST00000564703 RELAQ04206 551 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 MAP7Q14244 749 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 GRM7Q14831 915 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 RASA2Q15283 850 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 FAM214AQ32MH5 1076 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 MANEAQ5SRI9 462 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 ZNF425Q6IV72 752 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 LCA5Q86VQ0 697 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 PAQR7Q86WK9 346 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 MREGQ8N565 214 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 TTC29Q8NA56 475 aaPredicted RBP15.32■□□□□ 0.04
RAB40C-208ENST00000564703 GALNT6Q8NCL4 622 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 NKD1Q969G9 470 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 KIAA1143Q96AT1 154 aaPredicted RBP15.32■□□□□ 0.04
RAB40C-208ENST00000564703 ATOH8Q96SQ7 321 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 NLNQ9BYT8 704 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 SPRY4Q9C004 299 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 PCMTD2Q9NV79 361 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 DCDC2Q9UHG0 476 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 PTBP2Q9UKA9 531 aaKnown RBP15.32■□□□□ 0.04
RAB40C-208ENST00000564703 TMCO1Q9UM00 188 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 CHD8Q9HCK8 2581 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 SPTBP11277 2137 aa15.32■□□□□ 0.04
RAB40C-208ENST00000564703 HEATR5BQ9P2D3 2071 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 UBXN8O00124 270 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 MAP2K7O14733 419 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 CLGNO14967 610 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 ZSCAN9O15535 394 aaPredicted RBP15.31■□□□□ 0.04
RAB40C-208ENST00000564703 CCNT2O60583 730 aaKnown RBP15.31■□□□□ 0.04
RAB40C-208ENST00000564703 CTSVO60911 334 aa15.31■□□□□ 0.04
RAB40C-208ENST00000564703 CDH1P12830 882 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms