RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CCDC177Q9NQR7 707 aaPredicted RBP3.72□□□□□ -1.81
CHD9-212ENST00000564641 NFKBIL1Q9UBC1 381 aaPredicted RBP3.72□□□□□ -1.81
CHD9-212ENST00000564641 MORF4L1Q9UBU8 362 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 ASIC3Q9UHC3 531 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 TJP1Q07157 1748 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 TIAM2Q8IVF5 1701 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 NRXN2Q9P2S2 1712 aa3.72□□□□□ -1.81
CHD9-212ENST00000564641 CDHR2Q9BYE9 1310 aa3.71□□□□□ -1.81
CHD9-212ENST00000564641 FER1L6Q2WGJ9 1857 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 KIAA1551Q9HCM1 1747 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 A0A1B0GUL7 405 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 hCG_1807616A0A1W2PRN6 198 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 CDRT15L2A8MXV6 281 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 A8MZ25 164 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 ERVV-1B6SEH8 477 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 P4HA2O15460 535 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 MBD3O95983 291 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 DNTTP04053 509 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 RPN1P04843 607 aaKnown RBP3.71□□□□□ -1.82
CHD9-212ENST00000564641 EIF2S1P05198 315 aaKnown RBP3.71□□□□□ -1.82
CHD9-212ENST00000564641 CBLP22681 906 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 COPB2P35606 906 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 ACTN2P35609 894 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 TPM4P67936 248 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 PRAMEP78395 509 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 RIGQ13278 110 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 SLC39A6Q13433 755 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 TNIP1Q15025 636 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 TAF7Q15545 349 aaPredicted RBP3.71□□□□□ -1.82
CHD9-212ENST00000564641 MTHFSDQ2M296 383 aaKnown RBP3.71□□□□□ -1.82
CHD9-212ENST00000564641 PARP10Q53GL7 1025 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 MFSD4BQ5TF39 518 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 PRR5LQ6MZQ0 368 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 TMEM154Q6P9G4 183 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 USP50Q70EL3 339 aaPredicted RBP3.71□□□□□ -1.82
CHD9-212ENST00000564641 IKBIPQ70UQ0 350 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 ZNF554Q86TJ5 538 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 EGFL6Q8IUX8 553 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 ADGRF2Q8IZF7 708 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 ZNF383Q8NA42 475 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 PPFIBP2Q8ND30 876 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 ZNF397Q8NF99 534 aaPredicted RBP3.71□□□□□ -1.82
CHD9-212ENST00000564641 KIF18AQ8NI77 898 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 POMGNT1Q8WZA1 660 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 SUSD6Q92537 303 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 SYAP1Q96A49 352 aaPredicted RBP3.71□□□□□ -1.82
CHD9-212ENST00000564641 MAGED4Q96JG8 741 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 SGK494Q96LW2 274 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 SLF1Q9BQI6 1058 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 CENPOQ9BU64 300 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 AP1M1Q9BXS5 423 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 RAI14Q9P0K7 980 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 ADD3Q9UEY8 706 aaKnown RBP3.71□□□□□ -1.82
CHD9-212ENST00000564641 TSPYL4Q9UJ04 414 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 ABT1Q9ULW3 272 aaKnown RBP3.71□□□□□ -1.82
CHD9-212ENST00000564641 NIP7Q9Y221 180 aaKnown RBP eCLIP3.71□□□□□ -1.82
CHD9-212ENST00000564641 SCN7AQ01118 1682 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 UBR2Q8IWV8 1755 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 ARFGEF2Q9Y6D5 1785 aa3.71□□□□□ -1.82
CHD9-212ENST00000564641 FAM237BA0A1B0GVD1 139 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 PTGES3LE9PB15 166 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 KLF11O14901 512 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 ATP6V0E1O15342 81 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 PIGNO95427 931 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 GH2P01242 217 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 ZNF853P0CG23 659 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 PRKAR2BP31323 418 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 ACSL1P33121 698 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 EPHX2P34913 555 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 SSR1P43307 286 aaKnown RBP3.7□□□□□ -1.82
CHD9-212ENST00000564641 CCR10P46092 362 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 CDH11P55287 796 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 CDR2Q01850 454 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 LGALS3BPQ08380 585 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 STK4Q13043 487 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 GPR17Q13304 367 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 CRYMQ14894 314 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 WDR43Q15061 677 aaKnown RBP eCLIP3.7□□□□□ -1.82
CHD9-212ENST00000564641 SGSM1Q2NKQ1 1148 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 DEFB115Q30KQ5 88 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 TTC31Q49AM3 519 aaPredicted RBP3.7□□□□□ -1.82
CHD9-212ENST00000564641 RARS2Q5T160 578 aaKnown RBP3.7□□□□□ -1.82
CHD9-212ENST00000564641 ADALQ6DHV7 355 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 Q6ZSR9 355 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 ADGRA1Q86SQ6 560 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 GALNT13Q8IUC8 556 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 ERC1Q8IUD2 1116 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 C10orf67Q8IYJ2 551 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 CRYBG2Q8N1P7 616 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 FAM184AQ8NB25 1140 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 TMEM178AQ8NBL3 297 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 KCNG4Q8TDN1 519 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 PERPQ96FX8 193 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 PGAM5Q96HS1 289 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 SLC22A12Q96S37 553 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 MYADMQ96S97 322 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 BAG1Q99933 345 aaPredicted RBP3.7□□□□□ -1.82
CHD9-212ENST00000564641 C1QTNF1Q9BXJ1 281 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 ZHX2Q9Y6X8 837 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms