RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 MAST4O15021 2626 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 FLNCQ14315 2725 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 DNALI1O14645 258 aaPredicted RBP16.87■□□□□ 0.29
NME3-205ENST00000563854 FFAR3O14843 346 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 GPR42O15529 346 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 ZBTB14O43829 449 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 HSD17B2P37059 387 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 OCA2Q04671 838 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 AIMP2Q13155 320 aaKnown RBP16.87■□□□□ 0.29
NME3-205ENST00000563854 PTK6Q13882 451 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 MUM1Q2TAK8 710 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 BBS9Q3SYG4 887 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 IRAK1BP1Q5VVH5 260 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 FBXO42Q6P3S6 717 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 PAQR7Q86WK9 346 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 FAM26EQ8N5C1 309 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 CSNK1A1LQ8N752 337 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 ASB11Q8WXH4 323 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 RERGQ96A58 199 aaPredicted RBP16.87■□□□□ 0.29
NME3-205ENST00000563854 PNPLA2Q96AD5 504 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 C10orf90Q96M02 699 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 AARSD1Q9BTE6 412 aaKnown RBP16.87■□□□□ 0.29
NME3-205ENST00000563854 ILKAPQ9H0C8 392 aaPredicted RBP16.87■□□□□ 0.29
NME3-205ENST00000563854 SLC26A1Q9H2B4 701 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 C5AR2Q9P296 337 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 HS3ST3B1Q9Y662 390 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 COMMD10Q9Y6G5 202 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 COL12A1Q99715 3063 aa16.87■□□□□ 0.29
NME3-205ENST00000563854 IGKV1-8A0A0C4DH67 115 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 E7ENX8 843 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 CES2O00748 559 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 SOCS6O14544 535 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 ONECUT2O95948 504 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 STATHP02808 62 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 TAP2Q03519 686 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 HKDC1Q2TB90 917 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 TUBB8Q3ZCM7 444 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 HP1BP3Q5SSJ5 553 aaPredicted RBP16.86■□□□□ 0.29
NME3-205ENST00000563854 PRAMEF13Q5VWM6 474 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 PRMT9Q6P2P2 845 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 PLD3Q8IV08 490 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 KLHL7Q8IXQ5 586 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 PARP9Q8IXQ6 854 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 GALNT11Q8NCW6 608 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 GABPB2Q8TAK5 448 aaPredicted RBP16.86■□□□□ 0.29
NME3-205ENST00000563854 STT3BQ8TCJ2 826 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 TM9SF4Q92544 642 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 ALKBH8Q96BT7 664 aaKnown RBP16.86■□□□□ 0.29
NME3-205ENST00000563854 MIEF2Q96C03 454 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 ZNF552Q9H707 407 aaPredicted RBP16.86■□□□□ 0.29
NME3-205ENST00000563854 SYNPO2LQ9H987 977 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 PPANQ9NQ55 473 aaKnown RBP16.86■□□□□ 0.29
NME3-205ENST00000563854 CUEDC1Q9NWM3 386 aaPredicted RBP16.86■□□□□ 0.29
NME3-205ENST00000563854 UTP6Q9NYH9 597 aaKnown RBP16.86■□□□□ 0.29
NME3-205ENST00000563854 KLHL42Q9P2K6 505 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 ZNF282Q9UDV7 671 aaPredicted RBP16.86■□□□□ 0.29
NME3-205ENST00000563854 RUVBL1Q9Y265 456 aaKnown RBP16.86■□□□□ 0.29
NME3-205ENST00000563854 RELNP78509 3460 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 NUP210LQ5VU65 1888 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 NAV2Q8IVL1 2488 aa16.86■□□□□ 0.29
NME3-205ENST00000563854 USP27XA6NNY8 438 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 HAT1O14929 419 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 KLHL41O60662 606 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 IPO13O94829 963 aaKnown RBP16.85■□□□□ 0.29
NME3-205ENST00000563854 EZRP15311 586 aaKnown RBP16.85■□□□□ 0.29
NME3-205ENST00000563854 TCP1P17987 556 aaKnown RBP16.85■□□□□ 0.29
NME3-205ENST00000563854 IMPA1P29218 277 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 PRDX1Q06830 199 aaKnown RBP16.85■□□□□ 0.29
NME3-205ENST00000563854 KLC1Q07866 573 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 SRSF1Q07955 248 aaKnown RBP eCLIP16.85■□□□□ 0.29
NME3-205ENST00000563854 PRTGQ2VWP7 1150 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 PLEKHN1Q494U1 663 aaPredicted RBP16.85■□□□□ 0.29
NME3-205ENST00000563854 MSS51Q4VC12 460 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 SPANXN3Q5MJ09 141 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 UGT3A1Q6NUS8 523 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 KIRREL2Q6UWL6 708 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 PCGF5Q86SE9 256 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 IQCKQ8N0W5 287 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 ZADH2Q8N4Q0 377 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 FBXO15Q8NCQ5 510 aaPredicted RBP16.85■□□□□ 0.29
NME3-205ENST00000563854 C2CD4AQ8NCU7 369 aaPredicted RBP16.85■□□□□ 0.29
NME3-205ENST00000563854 CFAP36Q96G28 342 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 MESP1Q9BRJ9 268 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 ZBTB20Q9HC78 741 aaPredicted RBP16.85■□□□□ 0.29
NME3-205ENST00000563854 SEMA3GQ9NS98 782 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 SLC17A6Q9P2U8 582 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 TRPC4Q9UBN4 977 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 B3GNT3Q9Y2A9 372 aa16.85■□□□□ 0.29
NME3-205ENST00000563854 VSTM2BA6NLU5 285 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 GFYI3L273 518 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 ZGLP1P0C6A0 271 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 CARSP49589 748 aaKnown RBP16.84■□□□□ 0.29
NME3-205ENST00000563854 RGS4P49798 205 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 TBPL1P62380 186 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 ABATP80404 500 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 VWA2Q5GFL6 755 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 RBM20Q5T481 1227 aaKnown RBP16.84■□□□□ 0.29
NME3-205ENST00000563854 ZNF425Q6IV72 752 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 CYHR1Q6ZMK1 362 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 MBOAT1Q6ZNC8 495 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms