RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 ALAS2P22557 587 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 SPRP35270 261 aaPredicted RBP12.83□□□□□ -0.36
CLK3-213ENST00000563842 GP5P40197 560 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 NAB1Q13506 487 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 LY6DQ14210 128 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 NCF4Q15080 339 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 UGT8Q16880 541 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 DEFB109BQ30KR1 87 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 GRTP1Q5TC63 336 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 ZNF385CQ66K41 422 aaPredicted RBP12.83□□□□□ -0.36
CLK3-213ENST00000563842 AGTRAPQ6RW13 159 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 ZDHHC24Q6UX98 284 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 CTAGE3PQ8IX95 158 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 ENDOVQ8N8Q3 282 aaKnown RBP12.83□□□□□ -0.36
CLK3-213ENST00000563842 PPFIBP2Q8ND30 876 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 ZNF285Q96NJ3 590 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 GBP5Q96PP8 586 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 SLC6A20Q9NP91 592 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 ABCF3Q9NUQ8 709 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 TMEM184CQ9NVA4 438 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 GEMIN8Q9NWZ8 242 aaKnown RBP12.83□□□□□ -0.36
CLK3-213ENST00000563842 ARL15Q9NXU5 204 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 IFT80Q9P2H3 777 aaPredicted RBP12.83□□□□□ -0.36
CLK3-213ENST00000563842 DHCR7Q9UBM7 475 aaKnown RBP12.83□□□□□ -0.36
CLK3-213ENST00000563842 TUBD1Q9UJT1 453 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 ADAMTS6Q9UKP5 1117 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 TCFL5Q9UL49 500 aa12.83□□□□□ -0.36
CLK3-213ENST00000563842 NOVA2Q9UNW9 492 aaKnown RBP12.83□□□□□ -0.36
CLK3-213ENST00000563842 A0A1B0GX78 115 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 FITM1A5D6W6 292 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 FAM159BA6NKW6 160 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 DSCR3O14972 297 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 CTSVO60911 334 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 EZRP15311 586 aaKnown RBP12.82□□□□□ -0.36
CLK3-213ENST00000563842 PHBP35232 272 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 EMP3P54852 163 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 VSX2P58304 361 aaPredicted RBP12.82□□□□□ -0.36
CLK3-213ENST00000563842 TAS2R39P59534 338 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 GPX6P59796 221 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 TBPL1P62380 186 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 NKAIN1Q4KMZ8 207 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 WASHC2DQ5SRD0 308 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 C1orf189Q5VU69 101 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 PRAMEF13Q5VWM6 474 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 MLIPQ5VWP3 458 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 ZNF425Q6IV72 752 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 CAPN13Q6MZZ7 669 aaPredicted RBP12.82□□□□□ -0.36
CLK3-213ENST00000563842 FAM198BQ6UWH4 519 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 TTLL10Q6ZVT0 673 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 ADCK2Q7Z695 626 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 PAQR7Q86WK9 346 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 C17orf64Q86WR6 236 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 LRRC56Q8IYG6 542 aaPredicted RBP12.82□□□□□ -0.36
CLK3-213ENST00000563842 RERGQ96A58 199 aaPredicted RBP12.82□□□□□ -0.36
CLK3-213ENST00000563842 IP6K3Q96PC2 410 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 RBBP8Q99708 897 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 HAUS8Q9BT25 410 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 LRRC4CQ9HCJ2 640 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 GPAMQ9HCL2 828 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 SMYD2Q9NRG4 433 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 CUTCQ9NTM9 273 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 MAN2B2Q9Y2E5 1009 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 SPTA1P02549 2419 aa12.82□□□□□ -0.36
CLK3-213ENST00000563842 NUP210LQ5VU65 1888 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 ESYT3A0FGR9 886 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 HYKKA2RU49 373 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 CXorf49A8MYA2 514 aaPredicted RBP12.81□□□□□ -0.36
CLK3-213ENST00000563842 ALBP02768 609 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 EIF2S1P05198 315 aaKnown RBP12.81□□□□□ -0.36
CLK3-213ENST00000563842 CAPN1P07384 714 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 FAM87AP0C7U9 286 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 GRK3P35626 688 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 GCGRP47871 477 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 POLE2P56282 527 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 RPS18P62269 152 aaKnown RBP12.81□□□□□ -0.36
CLK3-213ENST00000563842 NAE1Q13564 534 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 USP10Q14694 798 aaKnown RBP12.81□□□□□ -0.36
CLK3-213ENST00000563842 TRADDQ15628 312 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 PHKG1Q16816 387 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 MUM1Q2TAK8 710 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 GARNL3Q5VVW2 1013 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 LCN10Q6JVE6 187 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 PRMT9Q6P2P2 845 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 FBXO42Q6P3S6 717 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 LCTLQ6UWM7 567 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 ADAMTSL2Q86TH1 951 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 RAB43Q86YS6 212 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 EXD3Q8N9H8 876 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 FKBP10Q96AY3 582 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 FBXL8Q96CD0 374 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 RUFY1Q96T51 708 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 GPR22Q99680 433 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 MCMBPQ9BTE3 642 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 ATG10Q9H0Y0 220 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 ZDHHC18Q9NUE0 388 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 CTNNAL1Q9UBT7 734 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 CDC14AQ9UNH5 594 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 KCNMB2Q9Y691 235 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 SCN3AQ9NY46 2000 aa12.81□□□□□ -0.36
CLK3-213ENST00000563842 H0YGG7 62 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms