RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 PIPSLA2A3N6 862 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 LSM1O15116 133 aaKnown RBP21.16■□□□□ 0.98
LINC01960-201ENST00000563759 SDC3O75056 442 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 UNC5CO95185 931 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 ALDOCP09972 364 aaKnown RBP21.16■□□□□ 0.98
LINC01960-201ENST00000563759 PCNAP12004 261 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 UBE2IP63279 158 aaKnown RBP21.16■□□□□ 0.98
LINC01960-201ENST00000563759 MEF2AQ02078 507 aaPredicted RBP21.16■□□□□ 0.98
LINC01960-201ENST00000563759 KLF10Q13118 480 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 LAPTM5Q13571 262 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 SQLEQ14534 574 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 KIF19Q2TAC6 998 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 CPSF7Q8N684 471 aaKnown RBP21.16■□□□□ 0.98
LINC01960-201ENST00000563759 ZFPM2Q8WW38 1151 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 PPP3R2Q96LZ3 170 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 ACPTQ9BZG2 426 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 TMEM74BQ9NUR3 256 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 KMT2EQ8IZD2 1858 aa21.16■□□□□ 0.98
LINC01960-201ENST00000563759 MDC1Q14676 2089 aaKnown RBP21.16■□□□□ 0.98
LINC01960-201ENST00000563759 GPR37L1O60883 481 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 ERVK-8P63133 956 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 YBX1P67809 324 aaKnown RBP21.15■□□□□ 0.98
LINC01960-201ENST00000563759 HHEXQ03014 270 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 C6orf136Q5SQH8 315 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 SPATA19Q7Z5L4 167 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 WDR20Q8TBZ3 569 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 MTERF1Q99551 399 aaKnown RBP21.15■□□□□ 0.98
LINC01960-201ENST00000563759 TUBB6Q9BUF5 446 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 C1orf50Q9BV19 199 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 PELI2Q9HAT8 420 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 CUEDC1Q9NWM3 386 aaPredicted RBP21.15■□□□□ 0.98
LINC01960-201ENST00000563759 ADAMTS9Q9P2N4 1935 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 SLC22A2O15244 555 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 CHRM5P08912 532 aaPredicted RBP21.15■□□□□ 0.98
LINC01960-201ENST00000563759 ESRRAP11474 423 aaPredicted RBP21.15■□□□□ 0.98
LINC01960-201ENST00000563759 ZNF33BQ06732 778 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 AP5B1Q2VPB7 878 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 OR7G3Q8NG95 312 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 OR2A1Q8NGT9 310 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 NSL1Q96IY1 281 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 TAGLN3Q9UI15 199 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 PILRBQ9UKJ0 227 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 CCL27Q9Y4X3 112 aa21.15■□□□□ 0.98
LINC01960-201ENST00000563759 ISM1B1AKI9 464 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 YY2O15391 372 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 PIAS2O75928 621 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 ATP5HO75947 161 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 IDO1P14902 403 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 CALB2P22676 271 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 ADSLP30566 484 aaPredicted RBP21.14■□□□□ 0.97
LINC01960-201ENST00000563759 SCTRP47872 440 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 CCR8P51685 355 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 RPL38P63173 70 aaKnown RBP21.14■□□□□ 0.97
LINC01960-201ENST00000563759 PRDX1Q06830 199 aaKnown RBP21.14■□□□□ 0.97
LINC01960-201ENST00000563759 CSTF3Q12996 717 aaKnown RBP21.14■□□□□ 0.97
LINC01960-201ENST00000563759 GLIPR1L2Q4G1C9 344 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 ADCK2Q7Z695 626 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 KRT78Q8N1N4 520 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 SDR16C5Q8N3Y7 309 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 PIGKQ92643 395 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 UBE2E3Q969T4 207 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 SPHK1Q9NYA1 384 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 SNX11Q9Y5W9 270 aa21.14■□□□□ 0.97
LINC01960-201ENST00000563759 ANKRD65E5RJM6 399 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 LMO7DNF2Z398 122 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 CCNDBP1O95273 360 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 ANXA6P08133 673 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 T-ENOLP0DO92 83 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 PIK3R1P27986 724 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 CNR2P34972 360 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 CTSKP43235 329 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 ATP4BP51164 291 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 RPS6KA2Q15349 733 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 SF1Q15637 639 aaKnown RBP21.13■□□□□ 0.97
LINC01960-201ENST00000563759 GSTA3Q16772 222 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 DEFB133Q30KQ1 61 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 RBM12BQ8IXT5 1001 aaKnown RBP21.13■□□□□ 0.97
LINC01960-201ENST00000563759 CMTM5Q96DZ9 223 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 AIF1LQ9BQI0 150 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 SPNS1Q9H2V7 528 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 ERVMER34-1Q9H9K5 563 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 LRTM1Q9HBL6 345 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 MRPS30Q9NP92 439 aaKnown RBP21.13■□□□□ 0.97
LINC01960-201ENST00000563759 ZSCAN32Q9NX65 697 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 RSL1D1O76021 490 aaKnown RBP21.13■□□□□ 0.97
LINC01960-201ENST00000563759 CXCR2P25025 360 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 PEBP1P30086 187 aaKnown RBP21.13■□□□□ 0.97
LINC01960-201ENST00000563759 ARRB1P49407 418 aaPredicted RBP21.13■□□□□ 0.97
LINC01960-201ENST00000563759 C10orf62Q5T681 223 aaPredicted RBP21.13■□□□□ 0.97
LINC01960-201ENST00000563759 ADNP2Q6IQ32 1131 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 BMP8AQ7Z5Y6 402 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 FAM129CQ86XR2 697 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 RNF175Q8N4F7 328 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 POU5F2Q8N7G0 328 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 AVL9Q8NBF6 648 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 ABHD11Q8NFV4 315 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 OR10G6Q8NH81 332 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 HUS1BQ8NHY5 278 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 SLC22A18Q96BI1 424 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 ZC3H10Q96K80 434 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms