RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 LRFN5Q96NI6 719 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 GPR78Q96P69 363 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 RUFY1Q96T51 708 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 PAFAH2Q99487 392 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 PLCD4Q9BRC7 762 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 FANCEQ9HB96 536 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 MRPS30Q9NP92 439 aaKnown RBP8.19□□□□□ -1.1
UBR1-204ENST00000563239 LHX9Q9NQ69 397 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 INTS7Q9NVH2 962 aaKnown RBP8.19□□□□□ -1.1
UBR1-204ENST00000563239 ARL15Q9NXU5 204 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 UTP6Q9NYH9 597 aaKnown RBP8.19□□□□□ -1.1
UBR1-204ENST00000563239 CTNNAL1Q9UBT7 734 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 SERTAD3Q9UJW9 196 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 CROTQ9UKG9 612 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 OARD1Q9Y530 152 aa8.19□□□□□ -1.1
UBR1-204ENST00000563239 A0A087WUV0 522 aaPredicted RBP8.18□□□□□ -1.1
UBR1-204ENST00000563239 A0A0J9YVX5 310 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 FITM1A5D6W6 292 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 E7EQ34 232 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 H7BY64 318 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 MEN1O00255 615 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 HAT1O14929 419 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 TAPBPO15533 448 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 MAP3K7O43318 606 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 CPNE3O75131 537 aaKnown RBP8.18□□□□□ -1.1
UBR1-204ENST00000563239 OR2B3O76000 313 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 C2P06681 752 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 HIST1H2AGP0C0S8 130 aaPredicted RBP8.18□□□□□ -1.1
UBR1-204ENST00000563239 HIST1H2ADP20671 130 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 ITGAXP20702 1163 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 CRABP2P29373 138 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 SLC6A12P48065 614 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 UCNP55089 124 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 TMPRSS3P57727 454 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 ATP6V0D1P61421 351 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 SNRPNP63162 240 aaKnown RBP8.18□□□□□ -1.1
UBR1-204ENST00000563239 CXADRP78310 365 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 CSNK1G2P78368 415 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 ABATP80404 500 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 IRF9Q00978 393 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 RELAQ04206 551 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 TSTA3Q13630 321 aaPredicted RBP8.18□□□□□ -1.1
UBR1-204ENST00000563239 CSHL1Q14406 222 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 SLC29A2Q14542 456 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 UAP1Q16222 522 aaPredicted RBP8.18□□□□□ -1.1
UBR1-204ENST00000563239 ARHGAP40Q5TG30 622 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 BROXQ5VW32 411 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 PRAMEF13Q5VWM6 474 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 RHBDD2Q6NTF9 364 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 LCTLQ6UWM7 567 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 CCDC81Q6ZN84 652 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 ISCA2Q86U28 154 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 KLHDC8AQ8IYD2 350 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 ARHGEF39Q8N4T4 335 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 DTWD1Q8N5C7 304 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 IL22RA1Q8N6P7 574 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 ZNF655Q8N720 491 aaPredicted RBP8.18□□□□□ -1.1
UBR1-204ENST00000563239 KIAA1191Q96A73 305 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 RHBDF1Q96CC6 855 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 NXNL1Q96CM4 212 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 MED8Q96G25 268 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 SLC45A3Q96JT2 553 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 HIST1H2AHQ96KK5 128 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 PRAP1Q96NZ9 151 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 GBP5Q96PP8 586 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 OR2A5Q96R48 311 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 HIST1H2AJQ99878 128 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 H2AFJQ9BTM1 129 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 TRIM54Q9BYV2 358 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 CHST8Q9H2A9 424 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 ACTR5Q9H9F9 607 aaPredicted RBP8.18□□□□□ -1.1
UBR1-204ENST00000563239 CCDC177Q9NQR7 707 aaPredicted RBP8.18□□□□□ -1.1
UBR1-204ENST00000563239 SNX15Q9NRS6 342 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 SLC22A11Q9NSA0 550 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 STARD5Q9NSY2 213 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 ABCF3Q9NUQ8 709 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 ANKMY1Q9P2S6 941 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 ZNF180Q9UJW8 692 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 PADI1Q9ULC6 663 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 SNX7Q9UNH6 387 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 LHX6Q9UPM6 363 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 PCDHGA6Q9Y5G7 932 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 PCDHGA4Q9Y5G9 962 aa8.18□□□□□ -1.1
UBR1-204ENST00000563239 MRPS18BQ9Y676 258 aaKnown RBP8.18□□□□□ -1.1
UBR1-204ENST00000563239 A0A096LPK6 155 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 POC1B-GALNT4F8VUJ3 575 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 H0YGG7 62 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 NKX2-8O15522 239 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 ZSCAN9O15535 394 aaPredicted RBP8.17□□□□□ -1.1
UBR1-204ENST00000563239 P2RX6O15547 441 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 LCMT2O60294 686 aaKnown RBP8.17□□□□□ -1.1
UBR1-204ENST00000563239 SRPX2O60687 465 aaPredicted RBP8.17□□□□□ -1.1
UBR1-204ENST00000563239 CCNDBP1O95273 360 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 SLU7O95391 586 aaKnown RBP8.17□□□□□ -1.1
UBR1-204ENST00000563239 ONECUT2O95948 504 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 MT-ND3P03897 115 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 MTHFD2P13995 350 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 TCN2P20062 427 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 GGT5P36269 586 aa8.17□□□□□ -1.1
UBR1-204ENST00000563239 DLSTP36957 453 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms