RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 VIPP01282 170 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 ALDOCP09972 364 aaKnown RBP13.78□□□□□ -0.2
COMMD4-205ENST00000562310 COX4I1P13073 169 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 ACPPP15309 386 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 GNSP15586 552 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 HRH2P25021 359 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 MAOBP27338 520 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 MAPK1P28482 360 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 PTPN4P29074 926 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 SLC19A1P41440 591 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 CCR8P51685 355 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 HNRNPKP61978 463 aaKnown RBP eCLIP13.78□□□□□ -0.2
COMMD4-205ENST00000562310 UBE2IP63279 158 aaKnown RBP13.78□□□□□ -0.2
COMMD4-205ENST00000562310 SLBPQ14493 270 aaKnown RBP eCLIP13.78□□□□□ -0.2
COMMD4-205ENST00000562310 RPS6KA2Q15349 733 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 AP5B1Q2VPB7 878 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 PDCD4Q53EL6 469 aaKnown RBP13.78□□□□□ -0.2
COMMD4-205ENST00000562310 SGO1Q5FBB7 561 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 PRRT3Q5FWE3 981 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 ICE2Q659A1 982 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 PMS2CLQ68D20 193 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 TSSK4Q6SA08 328 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 AMIGO1Q86WK6 493 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 ZFAND4Q86XD8 727 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 LAS2Q8IYD9 372 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 LINC01555Q8NAE3 123 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 ABHD11Q8NFV4 315 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 WDR20Q8TBZ3 569 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 SLC22A18Q96BI1 424 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 KLHL29Q96CT2 875 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 CMTM7Q96FZ5 175 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 AIF1LQ9BQI0 150 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 ACPTQ9BZG2 426 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 BRINP2Q9C0B6 783 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 SDR39U1Q9NRG7 319 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-205ENST00000562310 NMRK1Q9NWW6 199 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 GEMIN8Q9NWZ8 242 aaKnown RBP13.78□□□□□ -0.2
COMMD4-205ENST00000562310 C1orf109Q9NX04 203 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 KLF15Q9UIH9 416 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 PPT2Q9UMR5 302 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 EIF3LQ9Y262 564 aaKnown RBP13.78□□□□□ -0.2
COMMD4-205ENST00000562310 TMED5Q9Y3A6 229 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 ARHGEF17Q96PE2 2063 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-205ENST00000562310 CACNA1IQ9P0X4 2223 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 A0A1B0GTW7 788 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 FKBP9O95302 570 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 CDH1P12830 882 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 VARSP26640 1264 aaKnown RBP13.77□□□□□ -0.21
COMMD4-205ENST00000562310 DPP6P42658 865 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 CORO7P57737 925 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 REEP5Q00765 189 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 CSTF1Q05048 431 aaKnown RBP13.77□□□□□ -0.21
COMMD4-205ENST00000562310 CYLC2Q14093 348 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-205ENST00000562310 PLCL1Q15111 1095 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 TCEA2Q15560 299 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 GLIPR1L2Q4G1C9 344 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 DNAL1Q4LDG9 190 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 ZNF542PQ5EBM4 170 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 CACHD1Q5VU97 1274 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 FAM219BQ5XKK7 198 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 SPAG17Q6Q759 2223 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 ASRGL1Q7L266 308 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 ARMCX6Q7L4S7 300 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 SLC9B2Q86UD5 537 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 ABCA7Q8IZY2 2146 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 DTWD2Q8NBA8 298 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 OR7G3Q8NG95 312 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 HBEGFQ99075 208 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 SRMSQ9H3Y6 488 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 XKR8Q9H6D3 395 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 NT5DC2Q9H857 520 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 ERVMER34-1Q9H9K5 563 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 FARSBQ9NSD9 589 aaKnown RBP13.77□□□□□ -0.21
COMMD4-205ENST00000562310 ZIM2Q9NZV7 527 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 CPNE7Q9UBL6 633 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 GIMAP2Q9UG22 337 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 SH2B3Q9UQQ2 575 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 GPR45Q9Y5Y3 372 aa13.77□□□□□ -0.21
COMMD4-205ENST00000562310 BBIP1A8MTZ0 92 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 FOXE1O00358 373 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-205ENST00000562310 CHRM5P08912 532 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-205ENST00000562310 PCNAP12004 261 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 GPX3P22352 226 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 GSTM2P28161 218 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 CMPK1P30085 196 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 CNR2P34972 360 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 PIK3CBP42338 1070 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 DHPSP49366 369 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-205ENST00000562310 RPL38P63173 70 aaKnown RBP13.76□□□□□ -0.21
COMMD4-205ENST00000562310 HMGCS1Q01581 520 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 PRDX1Q06830 199 aaKnown RBP13.76□□□□□ -0.21
COMMD4-205ENST00000562310 KIR2DS3Q14952 304 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 CATSPEREQ5SY80 951 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 LAYNQ6UX15 382 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 TMIGD1Q6UXZ0 262 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 SNX32Q86XE0 403 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 FAM129CQ86XR2 697 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 C2orf73Q8N5S3 287 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-205ENST00000562310 TBC1D19Q8N5T2 526 aa13.76□□□□□ -0.21
COMMD4-205ENST00000562310 FAM46DQ8NEK8 389 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms