RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 DNAJC11Q9NVH1 559 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 NDUFA13Q9P0J0 144 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 THAP10Q9P2Z0 257 aaPredicted RBP11.27□□□□□ -0.61
PCAT1-202ENST00000561978 MMP17Q9ULZ9 603 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 RIF1Q5UIP0 2472 aaKnown RBP11.27□□□□□ -0.61
PCAT1-202ENST00000561978 CKAP5Q14008 2032 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 NPIPB8E9PQR5 432 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 INPP4BO15327 924 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 UGDHO60701 494 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 EPHX1P07099 455 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 FAM58BPP0C7Q3 252 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 ELFN1P0C7U0 828 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 HOXB2P14652 356 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 NTSR1P30989 418 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 CCR3P51677 355 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 CSTF1Q05048 431 aaKnown RBP11.27□□□□□ -0.61
PCAT1-202ENST00000561978 KIAA0040Q15053 153 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 CPSF6Q16630 551 aaKnown RBP eCLIP11.27□□□□□ -0.61
PCAT1-202ENST00000561978 CYP51A1Q16850 503 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 PTCHD3Q3KNS1 767 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 SGO1Q5FBB7 561 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 LIPJQ5W064 366 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 SERPINA13PQ6UXR4 307 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 MBOAT1Q6ZNC8 495 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 AMIGO2Q86SJ2 522 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 LIX1Q8N485 282 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 PAPD5Q8NDF8 572 aaKnown RBP11.27□□□□□ -0.61
PCAT1-202ENST00000561978 POP5Q969H6 163 aaKnown RBP11.27□□□□□ -0.61
PCAT1-202ENST00000561978 GLYATL1Q969I3 302 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 FBXL8Q96CD0 374 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 C9orf16Q9BUW7 83 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 AGPAT4Q9NRZ5 378 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 FARSBQ9NSD9 589 aaKnown RBP11.27□□□□□ -0.61
PCAT1-202ENST00000561978 INTS7Q9NVH2 962 aaKnown RBP11.27□□□□□ -0.61
PCAT1-202ENST00000561978 SLAMF8Q9P0V8 285 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 ZNHIT2Q9UHR6 403 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 RAPGEFL1Q9UHV5 662 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 ANAPC2Q9UJX6 822 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 STON1Q9Y6Q2 735 aa11.27□□□□□ -0.61
PCAT1-202ENST00000561978 ZFHX2Q9C0A1 2572 aaPredicted RBP11.26□□□□□ -0.61
PCAT1-202ENST00000561978 ABCA7Q8IZY2 2146 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 EP300Q09472 2414 aaPredicted RBP11.26□□□□□ -0.61
PCAT1-202ENST00000561978 CFAP54Q96N23 3096 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 NUMA1Q14980 2115 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 MUC22E2RYF6 1773 aaPredicted RBP11.26□□□□□ -0.61
PCAT1-202ENST00000561978 WNT9AO14904 365 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 CTSLP07711 333 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 GSTM1P09488 218 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 MMP12P39900 470 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 HMGCS1Q01581 520 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 GSTM4Q03013 218 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 DMWDQ09019 674 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 SYTL3Q4VX76 610 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 USP39Q53GS9 565 aaKnown RBP11.26□□□□□ -0.61
PCAT1-202ENST00000561978 SDE2Q6IQ49 451 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 HMBOX1Q6NT76 420 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 LIPIQ6XZB0 460 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 CACUL1Q86Y37 369 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 RASGRP3Q8IV61 690 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 ADGRG5Q8IZF4 528 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 ARL10Q8N8L6 244 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 TMEM159Q96B96 161 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 CMTM7Q96FZ5 175 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 CNBD2Q96M20 576 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 CCDC138Q96M89 665 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 FOPNLQ96NB1 174 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 TMEM74Q96NL1 305 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 CCM2Q9BSQ5 444 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 CLMPQ9H6B4 373 aa11.26□□□□□ -0.61
PCAT1-202ENST00000561978 GMPR2Q9P2T1 348 aaKnown RBP11.26□□□□□ -0.61
PCAT1-202ENST00000561978 A0A1W2PQF6 199 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 K7ESF4 209 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 PSIP1O75475 530 aaKnown RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 PDYNP01213 254 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 PGRP06401 933 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 EPORP19235 508 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 DGKQP52824 942 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 CLDN8P56748 225 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 TXNL4AP83876 142 aaKnown RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 CREB5Q02930 508 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 ELP6Q0PNE2 266 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 ACOX1Q15067 660 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 NRF1Q16656 503 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 EOGTQ5NDL2 527 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 TMTC4Q5T4D3 741 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 C6orf52Q5T4I8 152 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 RNF220Q5VTB9 566 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 GLYATQ6IB77 296 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 TRMT11Q7Z4G4 463 aaKnown RBP11.25□□□□□ -0.61
PCAT1-202ENST00000561978 VRK3Q8IV63 474 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 TMIEQ8NEW7 156 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 GTF2H4Q92759 462 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 GLMNQ92990 594 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 AP2M1Q96CW1 435 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 NSMCE2Q96MF7 247 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 PPM1MQ96MI6 270 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 CIB1Q99828 191 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 ACPTQ9BZG2 426 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 SLC6A17Q9H1V8 727 aa11.25□□□□□ -0.61
PCAT1-202ENST00000561978 TMEM245Q9H330 911 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms