RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 CLDN8P56748 225 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 PIGFQ07326 219 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 CBX2Q14781 532 aaPredicted RBP10.66□□□□□ -0.7
NEIL1-202ENST00000561643 LRIT3Q3SXY7 679 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 CCDC58Q4VC31 144 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 DGKKQ5KSL6 1271 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 CRTC1Q6UUV9 634 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 CCDC81Q6ZN84 652 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 Q6ZNB5 142 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 SLCO6A1Q86UG4 719 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 SPARTQ8N0X7 666 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 C10orf111Q8N326 155 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 CBARPQ8N350 705 aaPredicted RBP10.66□□□□□ -0.7
NEIL1-202ENST00000561643 PJA1Q8NG27 643 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 OR2AP1Q8NGE2 309 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 PYCR2Q96C36 320 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 MAGED4Q96JG8 741 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 HIST1H2AHQ96KK5 128 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 HIST1H2AJQ99878 128 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 CPPED1Q9BRF8 314 aaPredicted RBP10.66□□□□□ -0.7
NEIL1-202ENST00000561643 H2AFJQ9BTM1 129 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 AKIP1Q9NQ31 210 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 SNX6Q9UNH7 406 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 SNX5Q9Y5X3 404 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 PLXNA4Q9HCM2 1894 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 LOC100130705A0A1B0GUX0 176 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 PITPNM1O00562 1244 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 PER2O15055 1255 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 AXIN1O15169 862 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 EFEMP2O95967 443 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 PRPS2P11908 318 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 EPORP19235 508 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 TACR1P25103 407 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 WEE1P30291 646 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 CCR7P32248 378 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 CD70P32970 193 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 CD47Q08722 323 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 TUBA3CQ13748 450 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 ATP13A5Q4VNC0 1218 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 CES5AQ6NT32 575 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.66□□□□□ -0.7
NEIL1-202ENST00000561643 TMEM179BQ7Z7N9 219 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 PARP8Q8N3A8 854 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 C7orf57Q8NEG2 295 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 OR52E4Q8NGH9 312 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 DNAJB8Q8NHS0 232 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 FRS2Q8WU20 508 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 AUTS2Q8WXX7 1259 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 TMEM169Q96HH4 297 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 WDR12Q9GZL7 423 aaKnown RBP10.66□□□□□ -0.7
NEIL1-202ENST00000561643 CCDC90BQ9GZT6 254 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 GPN2Q9H9Y4 310 aaPredicted RBP10.66□□□□□ -0.7
NEIL1-202ENST00000561643 EXD2Q9NVH0 621 aa10.66□□□□□ -0.7
NEIL1-202ENST00000561643 PTGES3LE9PB15 166 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 GFRA2O00451 464 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 ZNF682O95780 498 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 OR56A5P0C7T3 313 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 MAGP20916 626 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 AGXTP21549 392 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 GSTM2P28161 218 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 CSNK1DP48730 415 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 STK19P49842 368 aaPredicted RBP10.65□□□□□ -0.7
NEIL1-202ENST00000561643 LSM3P62310 102 aaKnown RBP10.65□□□□□ -0.7
NEIL1-202ENST00000561643 CYP4F8P98187 520 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 IL1RL1Q01638 556 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 BOP1Q14137 746 aaKnown RBP10.65□□□□□ -0.7
NEIL1-202ENST00000561643 CTU2Q2VPK5 515 aaKnown RBP10.65□□□□□ -0.7
NEIL1-202ENST00000561643 PLEKHG6Q3KR16 790 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 USP45Q70EL2 814 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 RBM23Q86U06 439 aaKnown RBP10.65□□□□□ -0.7
NEIL1-202ENST00000561643 HEATR4Q86WZ0 1026 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 APOLD1Q96LR9 279 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 C19orf43Q9BQ61 176 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 FUNDC2Q9BWH2 189 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 MAGIXQ9H6Y5 334 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 NEK6Q9HC98 313 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 SERHLQ9NQF3 203 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 CFAP97Q9P2B7 532 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 INSL5Q9Y5Q6 135 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 KIAA0100Q14667 2235 aaKnown RBP10.65□□□□□ -0.7
NEIL1-202ENST00000561643 TAF4O00268 1085 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 RFXANKO14593 260 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 NUAK1O60285 661 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 MAN1A2O60476 641 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 BMP4P12644 408 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 MAPK1P28482 360 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 CDKN2CP42773 168 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 FPGSQ05932 587 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 LRIF1Q5T3J3 769 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 RFLNAQ6ZTI6 216 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 TPRG1Q6ZUI0 275 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 LRRC70Q7Z2Q7 622 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 BBS7Q8IWZ6 715 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 SLC22A15Q8IZD6 547 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 FAM9CQ8IZT9 166 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 PYURFQ96I23 114 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 COQ7Q99807 217 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 PRM3Q9NNZ6 103 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 CREBZFQ9NS37 354 aa10.65□□□□□ -0.7
NEIL1-202ENST00000561643 ABCB8Q9NUT2 735 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms