RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 AIF1P55008 147 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 STX17P56962 302 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 OCA2Q04671 838 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 KLC1Q07866 573 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 OR1C1Q15619 314 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 ZIC1Q15915 447 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 KRTAP24-1Q3LI83 254 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 FILIP1LQ4L180 1135 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 C10orf62Q5T681 223 aaPredicted RBP5.03□□□□□ -1.6
HERC1-213ENST00000561359 PDPK2PQ6A1A2 396 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 TMEM220Q6QAJ8 160 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 SPESP1Q6UW49 350 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 RFX8Q6ZV50 586 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 COX15Q7KZN9 410 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 GALNTL5Q7Z4T8 443 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 WDR53Q7Z5U6 358 aaPredicted RBP5.03□□□□□ -1.6
HERC1-213ENST00000561359 CXorf67Q86X51 503 aaPredicted RBP5.03□□□□□ -1.6
HERC1-213ENST00000561359 TMTC1Q8IUR5 882 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 TRIM59Q8IWR1 403 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 METTL27Q8N6F8 245 aaPredicted RBP5.03□□□□□ -1.6
HERC1-213ENST00000561359 TMEM178AQ8NBL3 297 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 ACVR1CQ8NER5 493 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 STT3BQ8TCJ2 826 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 DENND1AQ8TEH3 1009 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 TMEM125Q96AQ2 219 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 MIEF2Q96C03 454 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 SIGLEC12Q96PQ1 595 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 LYSMD1Q96S90 227 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 TUBGCP2Q9BSJ2 902 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 CNPY3Q9BT09 278 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 C19orf24Q9BVV8 132 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 DHX35Q9H5Z1 703 aaKnown RBP5.03□□□□□ -1.6
HERC1-213ENST00000561359 RIC8BQ9NVN3 520 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 RMND1Q9NWS8 449 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 ANKRD10Q9NXR5 420 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 ACTR10Q9NZ32 417 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 UBP1Q9NZI7 540 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 PLCL2Q9UPR0 1127 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 HEBP2Q9Y5Z4 205 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 ALG6Q9Y672 507 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 MAU2Q9Y6X3 613 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 IGHV1-45A0A0A0MS14 117 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 VSTM2BA6NLU5 285 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 OR2AG2A6NM03 316 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 DBX1A6NMT0 343 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 CES2O00748 559 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 CLDN4O14493 209 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 TFECO14948 347 aaPredicted RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 DSCR3O14972 297 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 CCP110O43303 1012 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 DNAJB6O75190 326 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 PEX11BO96011 259 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 PRLP01236 227 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 POLBP06746 335 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 ZGLP1P0C6A0 271 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 ICAM2P13598 275 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 DESP17661 470 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 TRHRP34981 398 aaPredicted RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 GABRA4P48169 554 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 ZNF165P49910 485 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 NDUFA8P51970 172 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 EMP2P54851 167 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 DCDC1P59894 354 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 RPL26P61254 145 aaKnown RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 NOMO3P69849 1222 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 DSC2Q02487 901 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 OC90Q02509 493 aaPredicted RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 DMTNQ08495 405 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 STIM1Q13586 685 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 CUL4AQ13619 759 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 TUBA3CQ13748 450 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 DAZAP2Q15038 168 aaPredicted RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 MAPKAPK3Q16644 382 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 EXOC3L4Q17RC7 722 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 SLC25A35Q3KQZ1 300 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 CHRFAM7AQ494W8 412 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 PPP6R3Q5H9R7 873 aaPredicted RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 ACER2Q5QJU3 275 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 ZNF658Q5TYW1 1059 aaPredicted RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 METRNLQ641Q3 311 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 FCRLBQ6BAA4 426 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 SPINK14Q6IE38 97 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 TUBA3EQ6PEY2 450 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 BHLHB9Q6PI77 547 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 WDR59Q6PJI9 974 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 KDELC1Q6UW63 502 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 PRSS57Q6UWY2 283 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 GBP6Q6ZN66 633 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 ARHGEF18Q6ZSZ5 1173 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 SYDE1Q6ZW31 735 aaPredicted RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 AMIGO1Q86WK6 493 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 CREBRFQ8IUR6 639 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 FAM71AQ8IYT1 594 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 LRRC75A-AS1Q8N1F1 130 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 BEST3Q8N1M1 668 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 ATPAF2Q8N5M1 289 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 HORMAD2Q8N7B1 307 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 MDS2Q8NDY4 140 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 SLC30A5Q8TAD4 765 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 BRSK1Q8TDC3 778 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms