RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 DR1Q01658 176 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 TAP2Q03519 686 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 NKG7Q16617 165 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 UBE2R2Q712K3 238 aaPredicted RBP16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 OVCH1Q7RTY7 1134 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 PAQR7Q86WK9 346 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 ANP32BQ92688 251 aaKnown RBP16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 MIB2Q96AX9 1013 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 CERS2Q96G23 380 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 C10orf90Q96M02 699 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 NAPGQ99747 312 aaPredicted RBP16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 PLCD4Q9BRC7 762 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 WDR83Q9BRX9 315 aaKnown RBP16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 SOX17Q9H6I2 414 aaPredicted RBP16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 WDR54Q9H977 334 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 PLAC1Q9HBJ0 212 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 ANKMY1Q9P2S6 941 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 ICE1Q9Y2F5 2266 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 ZNF839A8K0R7 811 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 H0YGG7 62 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 GFYI3L273 518 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 FANCGO15287 622 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 TTI1O43156 1089 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 CCNDBP1O95273 360 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 ONECUT2O95948 504 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 PIM1P11309 404 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 HSD17B2P37059 387 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 ELK3P41970 407 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 SKIV2L2P42285 1042 aaKnown RBP16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 CARSP49589 748 aaKnown RBP16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 ARF3P61204 181 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 MORF4L2Q15014 288 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 FAM214AQ32MH5 1076 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 THEMIS2Q5TEJ8 643 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 ZNF425Q6IV72 752 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 CYHR1Q6ZMK1 362 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 MBOAT1Q6ZNC8 495 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 ADCK2Q7Z695 626 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 CNTN4Q8IWV2 1026 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 CLEC1AQ8NC01 280 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 CABS1Q96KC9 395 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 FER1L6-AS2Q96M78 137 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 NAT9Q9BTE0 207 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 MFRPQ9BY79 579 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 CUEDC1Q9NWM3 386 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 CDC23Q9UJX2 597 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 ADAMTS6Q9UKP5 1117 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 SAR1BQ9Y6B6 198 aa16.42■□□□□ 0.22
CDC42BPB-208ENST00000561271 TTLL8A6PVC2 850 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 EIF3FO00303 357 aaPredicted RBP16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 ZBTB14O43829 449 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 DPM1O60762 260 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 SORBS2O94875 1100 aaKnown RBP16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 ALBP02768 609 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 ITGA8P53708 1063 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 CDKN2DP55273 166 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 TBPL1P62380 186 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 PRDX1Q06830 199 aaKnown RBP16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 HKDC1Q2TB90 917 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 PRTGQ2VWP7 1150 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 VWA5B1Q5TIE3 1220 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 FBXO42Q6P3S6 717 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 TRMT10BQ6PF06 316 aaKnown RBP16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 SYDE1Q6ZW31 735 aaPredicted RBP16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 LRRC56Q8IYG6 542 aaPredicted RBP16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 PRSS58Q8IYP2 241 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 PDIK1LQ8N165 341 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 GALNT16Q8N428 558 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 CSNK1A1LQ8N752 337 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 GABPB2Q8TAK5 448 aaPredicted RBP16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 EEF1AKMT1Q8WVE0 214 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 SMAD5Q99717 465 aaKnown RBP16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 TRIM31Q9BZY9 425 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 SLC26A1Q9H2B4 701 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 PPANQ9NQ55 473 aaKnown RBP16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 TAS2R13Q9NYV9 303 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 FBXL4Q9UKA2 621 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 RUVBL1Q9Y265 456 aaKnown RBP16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 PCDHGB7Q9Y5F8 929 aa16.41■□□□□ 0.22
CDC42BPB-208ENST00000561271 AGPSO00116 658 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 SOCS6O14544 535 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 HAT1O14929 419 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 P2RX6O15547 441 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 STATHP02808 62 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 EZRP15311 586 aaKnown RBP16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 FBLP22087 321 aaKnown RBP16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 MMP11P24347 488 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 PGGT1BP53609 377 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 HIF1AQ16665 826 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 MUM1Q2TAK8 710 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 PRR30Q53SZ7 412 aaPredicted RBP16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 SLC6A19Q695T7 634 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 LRRC8EQ6NSJ5 796 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 UGT3A1Q6NUS8 523 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 HIBCHQ6NVY1 386 aaPredicted RBP16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 PAQR3Q6TCH7 311 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 PLD3Q8IV08 490 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 RBMXL3Q8N7X1 1067 aaKnown RBP16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 COL26A1Q96A83 441 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 LINGO1Q96FE5 620 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms