RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 FRG1Q14331 258 aaKnown RBP15.26■□□□□ 0.03
LMX1B-204ENST00000561065 ARHGAP19Q14CB8 494 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 MSS51Q4VC12 460 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 DCAF10Q5QP82 559 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 RBMXL3Q8N7X1 1067 aaKnown RBP15.26■□□□□ 0.03
LMX1B-204ENST00000561065 C2CD4AQ8NCU7 369 aaPredicted RBP15.26■□□□□ 0.03
LMX1B-204ENST00000561065 PPFIBP2Q8ND30 876 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 MNS1Q8NEH6 495 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 FKBP10Q96AY3 582 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 CERS2Q96G23 380 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 CFAP36Q96G28 342 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 C10orf90Q96M02 699 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 GPR21Q99679 349 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 MESP1Q9BRJ9 268 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 PLAC1Q9HBJ0 212 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 P4HTMQ9NXG6 502 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 GPR83Q9NYM4 423 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 STOX2Q9P2F5 926 aaPredicted RBP15.26■□□□□ 0.03
LMX1B-204ENST00000561065 SNX24Q9Y343 169 aa15.26■□□□□ 0.03
LMX1B-204ENST00000561065 PRRC2CQ9Y520 2896 aaKnown RBP15.26■□□□□ 0.03
LMX1B-204ENST00000561065 ALOX12BO75342 701 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 HAUS5O94927 633 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 SLC16A8O95907 504 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 ERVK-10P10266 1014 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 OR1D4P47884 311 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 UQCRFS1P47985 274 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 CARSP49589 748 aaKnown RBP15.25■□□□□ 0.03
LMX1B-204ENST00000561065 ARSFP54793 590 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 RRADP55042 308 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 TIAL1Q01085 375 aaKnown RBP eCLIP15.25■□□□□ 0.03
LMX1B-204ENST00000561065 GRM7Q14831 915 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 NKG7Q16617 165 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 TCTE1Q5JU00 501 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 WASHC2DQ5SRD0 308 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 CYHR1Q6ZMK1 362 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 CEP128Q6ZU80 1094 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 PIWIL4Q7Z3Z4 852 aaKnown RBP15.25■□□□□ 0.03
LMX1B-204ENST00000561065 CNTN4Q8IWV2 1026 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 CPNE9Q8IYJ1 553 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 MCOLN3Q8TDD5 553 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 PYROXD1Q8WU10 500 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 ZNF480Q8WV37 535 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 CDKL2Q92772 493 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 SMAD5Q99717 465 aaKnown RBP15.25■□□□□ 0.03
LMX1B-204ENST00000561065 WDR83Q9BRX9 315 aaKnown RBP15.25■□□□□ 0.03
LMX1B-204ENST00000561065 TRIM51Q9BSJ1 452 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 AARSD1Q9BTE6 412 aaKnown RBP15.25■□□□□ 0.03
LMX1B-204ENST00000561065 DPH7Q9BTV6 452 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 TRIM54Q9BYV2 358 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 ZFATQ9P243 1243 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 TXNDC16Q9P2K2 825 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 SLC17A6Q9P2U8 582 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 TAC3Q9UHF0 121 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 CDC23Q9UJX2 597 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 ZNF451Q9Y4E5 1061 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 TEX264Q9Y6I9 313 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 MAU2Q9Y6X3 613 aa15.25■□□□□ 0.03
LMX1B-204ENST00000561065 URI1O94763 535 aaPredicted RBP15.24■□□□□ 0.03
LMX1B-204ENST00000561065 CCNDBP1O95273 360 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 HIST1H2AGP0C0S8 130 aaPredicted RBP15.24■□□□□ 0.03
LMX1B-204ENST00000561065 HIST1H2ADP20671 130 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 PNLIPRP1P54315 467 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 SNRPNP63162 240 aaKnown RBP15.24■□□□□ 0.03
LMX1B-204ENST00000561065 CBLBQ13191 982 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 PRTGQ2VWP7 1150 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 YOD1Q5VVQ6 348 aaPredicted RBP15.24■□□□□ 0.03
LMX1B-204ENST00000561065 SLC6A19Q695T7 634 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 ZNF425Q6IV72 752 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 SHISA6Q6ZSJ9 500 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 OVCH1Q7RTY7 1134 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 PAQR7Q86WK9 346 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 IGDCC3Q8IVU1 814 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 LRRC56Q8IYG6 542 aaPredicted RBP15.24■□□□□ 0.03
LMX1B-204ENST00000561065 TTC29Q8NA56 475 aaPredicted RBP15.24■□□□□ 0.03
LMX1B-204ENST00000561065 FBXO15Q8NCQ5 510 aaPredicted RBP15.24■□□□□ 0.03
LMX1B-204ENST00000561065 ASB11Q8WXH4 323 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 SMPDL3AQ92484 453 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 PTERQ96BW5 349 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 HIST1H2AHQ96KK5 128 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 NDNQ99608 321 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 HIST1H2AJQ99878 128 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 ZFYVE21Q9BQ24 234 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 H2AFJQ9BTM1 129 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 MFRPQ9BY79 579 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 SLC26A1Q9H2B4 701 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 SOX17Q9H6I2 414 aaPredicted RBP15.24■□□□□ 0.03
LMX1B-204ENST00000561065 CHMP2BQ9UQN3 213 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 PCDHGB7Q9Y5F8 929 aa15.24■□□□□ 0.03
LMX1B-204ENST00000561065 E7ENX8 843 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 GFYI3L273 518 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 SOCS6O14544 535 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 FANCGO15287 622 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 SRPX2O60687 465 aaPredicted RBP15.23■□□□□ 0.03
LMX1B-204ENST00000561065 GSTA2P09210 222 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 GABRB3P28472 473 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 IMPA1P29218 277 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 CMPK1P30085 196 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 RPL21P46778 160 aaKnown RBP15.23■□□□□ 0.03
LMX1B-204ENST00000561065 TAP2Q03519 686 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 MGAT5Q09328 741 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms