RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 RHDQ02161 417 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 TSNQ15631 228 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 PTCHD3Q3KNS1 767 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 PRAMEF13Q5VWM6 474 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 CMC1Q7Z7K0 106 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 IFT20Q8IY31 132 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 SPATA6LQ8N4H0 392 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 ZSCAN1Q8NBB4 408 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 STARD8Q92502 1023 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 MR1Q95460 341 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 CLIP3Q96DZ5 547 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 HIST1H2AHQ96KK5 128 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 OR2A5Q96R48 311 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 OR4K3Q96R72 315 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 HIST1H2AJQ99878 128 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 SELENOSQ9BQE4 189 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 H2AFJQ9BTM1 129 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 TXLNGYQ9BZA5 131 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 CCDC177Q9NQR7 707 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 STARD5Q9NSY2 213 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 ARL15Q9NXU5 204 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 UTP6Q9NYH9 597 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 SNX7Q9UNH6 387 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 MDC1Q14676 2089 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 PIEZO2Q9H5I5 2752 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 H7BY64 318 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 MED26O95402 600 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 ONECUT2O95948 504 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 KLK3P07288 261 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 FURINP09958 794 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 RAB40ALP0C0E4 278 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 FAM153BP0C7A2 387 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 SLC35E2BP0CK96 405 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 CCDC166P0CW27 439 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 CD1DP15813 335 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 PHBP35232 272 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 KCNC1P48547 511 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 VSX2P58304 361 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 DLG1Q12959 904 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 NAA25Q14CX7 972 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 PRTGQ2VWP7 1150 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 LINC00303Q3SY05 128 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 FAM153CQ494X1 144 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 SOWAHCQ53LP3 525 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 TCTE1Q5JU00 501 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 WASHC2DQ5SRD0 308 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 THEMIS2Q5TEJ8 643 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 LCTLQ6UWM7 567 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 SLC44A1Q8WWI5 657 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 PTERQ96BW5 349 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 PYCR2Q96C36 320 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 PRAP1Q96NZ9 151 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 UBL7Q96S82 380 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 ZFYVE21Q9BQ24 234 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 GPR87Q9BY21 358 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 TRIM54Q9BYV2 358 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 FAM117AQ9C073 453 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 UNKQ9C0B0 810 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 PCBD2Q9H0N5 130 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 SLC22A11Q9NSA0 550 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 ABCF3Q9NUQ8 709 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 TMEM184CQ9NVA4 438 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 DHCR7Q9UBM7 475 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 CTNNAL1Q9UBT7 734 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 KCND3Q9UK17 655 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 SRPK3Q9UPE1 567 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 FARSAQ9Y285 508 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 OARD1Q9Y530 152 aa14.61□□□□□ -0.07
SNRPA1-213ENST00000560856 H0YGG7 62 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 HAT1O14929 419 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 KATNA1O75449 491 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 CREG1O75629 220 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 GUCA1CO95843 209 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 RECKO95980 971 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 MYBL2P10244 700 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 CCND1P24385 295 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 PTPN4P29074 926 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 ARF3P61204 181 aaPredicted RBP14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 RPS18P62269 152 aaKnown RBP14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 CSNK1G2P78368 415 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 NFKB2Q00653 900 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 BMPR2Q13873 1038 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 SLMAPQ14BN4 828 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 OR4D1Q15615 310 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 TBR1Q16650 682 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 ATP1A1-AS1Q5TC04 95 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 C1orf189Q5VU69 101 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 ADAMTSL2Q86TH1 951 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 PLD3Q8IV08 490 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 ARHGEF39Q8N4T4 335 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 PROKR1Q8TCW9 393 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 ATL1Q8WXF7 558 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 MRRFQ96E11 262 aaKnown RBP14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 MED8Q96G25 268 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 DPH2Q9BQC3 489 aaPredicted RBP14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 NLNQ9BYT8 704 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 ACTL8Q9H568 366 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 IGSF5Q9NSI5 407 aa14.6□□□□□ -0.07
SNRPA1-213ENST00000560856 ERVH48-1M5A8F1 160 aa14.59□□□□□ -0.07
SNRPA1-213ENST00000560856 ATXN7O15265 892 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms