RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SMPDL3AQ92484 453 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 UBE2E3Q969T4 207 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 TMEM125Q96AQ2 219 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 TESCQ96BS2 214 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 C12orf66Q96MD2 445 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 WDR92Q96MX6 357 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 OR2M4Q96R27 311 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 MTERF1Q99551 399 aaKnown RBP12.46□□□□□ -0.42
SNX1-211ENST00000560829 IL1RL2Q9HB29 575 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 SIRT5Q9NXA8 310 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 PLAGL1Q9UM63 463 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 PPT2Q9UMR5 302 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 RUVBL1Q9Y265 456 aaKnown RBP12.46□□□□□ -0.42
SNX1-211ENST00000560829 TDRKHQ9Y2W6 561 aaKnown RBP12.46□□□□□ -0.42
SNX1-211ENST00000560829 GPSM3Q9Y4H4 160 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 HS3ST3A1Q9Y663 406 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 CFAP20Q9Y6A4 193 aaKnown RBP12.46□□□□□ -0.42
SNX1-211ENST00000560829 ANKRD12Q6UB98 2062 aa12.46□□□□□ -0.42
SNX1-211ENST00000560829 ZFC3H1O60293 1989 aaKnown RBP12.45□□□□□ -0.42
SNX1-211ENST00000560829 PIPSLA2A3N6 862 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 MAGEB17A8MXT2 336 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 H3BNX3 289 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 PRMT3O60678 531 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 PGRP06401 933 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 TACR1P25103 407 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 HTR1BP28222 390 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 AKT2P31751 481 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
SNX1-211ENST00000560829 ERFP50548 548 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 CCR5P51681 352 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 DGKQP52824 942 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 PWP1Q13610 501 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 CAPRIN1Q14444 709 aaKnown RBP12.45□□□□□ -0.42
SNX1-211ENST00000560829 CLCA4Q14CN2 919 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 HIST2H2ACQ16777 129 aaPredicted RBP12.45□□□□□ -0.42
SNX1-211ENST00000560829 C6orf10Q5SRN2 563 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 HIST2H2AA3Q6FI13 130 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 PTCRAQ6ISU1 281 aaPredicted RBP12.45□□□□□ -0.42
SNX1-211ENST00000560829 ZFP1Q6P2D0 407 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 GCNT7Q6ZNI0 430 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 FAM129CQ86XR2 697 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 HID1Q8IV36 788 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 KIAA2013Q8IYS2 634 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 RNF175Q8N4F7 328 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 RAB42Q8N4Z0 105 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 TMEM145Q8NBT3 493 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 FAM156AQ8NDB6 213 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 BHLHE22Q8NFJ8 381 aaPredicted RBP12.45□□□□□ -0.42
SNX1-211ENST00000560829 DNAJB8Q8NHS0 232 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 PYDC1Q8WXC3 89 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 OR1E3Q8WZA6 343 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 APOLD1Q96LR9 279 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 TMEM74Q96NL1 305 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 ANKRD27Q96NW4 1050 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 OSGEPL1Q9H4B0 414 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 MVB12BQ9H7P6 319 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 CARS2Q9HA77 564 aaKnown RBP12.45□□□□□ -0.42
SNX1-211ENST00000560829 PELI2Q9HAT8 420 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 WASH6PQ9NQA3 447 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 PLEKHM1Q9Y4G2 1056 aa12.45□□□□□ -0.42
SNX1-211ENST00000560829 A0A1W2PPV9 198 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 ETHE1O95571 254 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 TCN1P20061 433 aaPredicted RBP12.44□□□□□ -0.42
SNX1-211ENST00000560829 VHLP40337 213 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 PIK3CBP42338 1070 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 EEFSECP57772 596 aaKnown RBP12.44□□□□□ -0.42
SNX1-211ENST00000560829 YBX1P67809 324 aaKnown RBP12.44□□□□□ -0.42
SNX1-211ENST00000560829 BNIP2Q12982 314 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 TSTA3Q13630 321 aaPredicted RBP12.44□□□□□ -0.42
SNX1-211ENST00000560829 LRRC32Q14392 662 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 FAM174BQ3ZCQ3 159 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 SPANXN4Q5MJ08 99 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 THEMIS2Q5TEJ8 643 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 NANOGP8Q6NSW7 305 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 DUS1LQ6P1R4 473 aaKnown RBP12.44□□□□□ -0.42
SNX1-211ENST00000560829 GALNT18Q6P9A2 607 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 WASH2PQ6VEQ5 465 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 LRRC74BQ6ZQY2 392 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 MSANTD1Q6ZTZ1 278 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 KRTCAP2Q8N6L1 136 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 HIPK4Q8NE63 616 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 ABHD11Q8NFV4 315 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 CHTF18Q8WVB6 975 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 NRG4Q8WWG1 115 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 GTF2H4Q92759 462 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 PDXPQ96GD0 296 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 CAMK1GQ96NX5 476 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 FERD3LQ96RJ6 166 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 CDX2Q99626 313 aaPredicted RBP12.44□□□□□ -0.42
SNX1-211ENST00000560829 RAB11FIP5Q9BXF6 653 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 NANOGQ9H9S0 305 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 NMRK1Q9NWW6 199 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 SLAMF8Q9P0V8 285 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 MOSPD1Q9UJG1 213 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 PCOLCE2Q9UKZ9 415 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 C15orf41Q9Y2V0 281 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 H0Y8X5 98 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 IGHV4-34P06331 123 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 C8BP07358 591 aa12.44□□□□□ -0.42
SNX1-211ENST00000560829 PCNAP12004 261 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms