RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 HIST2H2BCQ6DN03 193 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 IGFL3Q6UXB1 125 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 PAQR7Q86WK9 346 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 PLD3Q8IV08 490 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 CPNE9Q8IYJ1 553 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 IQCKQ8N0W5 287 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 CSNK1A1LQ8N752 337 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 NAT8LQ8N9F0 302 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 STT3BQ8TCJ2 826 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 ZNF480Q8WV37 535 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 ASB11Q8WXH4 323 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 INPP5DQ92835 1189 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 MIEF2Q96C03 454 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 C10orf90Q96M02 699 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 OSBPL9Q96SU4 736 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 NAP1L3Q99457 506 aaPredicted RBP9.75□□□□□ -0.85
LDLR-214ENST00000560628 GPR21Q99679 349 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 CRB3Q9BUF7 120 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 ILKAPQ9H0C8 392 aaPredicted RBP9.75□□□□□ -0.85
LDLR-214ENST00000560628 ENAMQ9NRM1 1142 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 SEMA3GQ9NS98 782 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 IARS2Q9NSE4 1012 aaKnown RBP9.75□□□□□ -0.85
LDLR-214ENST00000560628 TRMT1Q9NXH9 659 aaKnown RBP9.75□□□□□ -0.85
LDLR-214ENST00000560628 NXT1Q9UKK6 140 aaKnown RBP9.75□□□□□ -0.85
LDLR-214ENST00000560628 FBXO5Q9UKT4 447 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 RUVBL1Q9Y265 456 aaKnown RBP9.75□□□□□ -0.85
LDLR-214ENST00000560628 DHRS7Q9Y394 339 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 CSAG2Q9Y5P2 127 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 COL12A1Q99715 3063 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 RELNP78509 3460 aa9.75□□□□□ -0.85
LDLR-214ENST00000560628 E7ENX8 843 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 GFYI3L273 518 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 SMAPO00193 183 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 ZBTB14O43829 449 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 KLHL41O60662 606 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 PHF2O75151 1096 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 BANF1O75531 89 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 STATHP02808 62 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 MPC1LP0DKB6 136 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 FBLP22087 321 aaKnown RBP9.74□□□□□ -0.85
LDLR-214ENST00000560628 VARSP26640 1264 aaKnown RBP9.74□□□□□ -0.85
LDLR-214ENST00000560628 HSD17B2P37059 387 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 MAGEA3P43357 314 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 TAP2Q03519 686 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 Q0VFX4 171 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 NAA25Q14CX7 972 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 NR6A1Q15406 480 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 PPP1R7Q15435 360 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 HKDC1Q2TB90 917 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 TUBB8Q3ZCM7 444 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 THEMIS2Q5TEJ8 643 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 AGAP7PQ5VUJ5 663 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 IRAK1BP1Q5VVH5 260 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 ICE2Q659A1 982 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 FAAH2Q6GMR7 532 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 PRMT9Q6P2P2 845 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 NEK10Q6ZWH5 1172 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 PIWIL4Q7Z3Z4 852 aaKnown RBP9.74□□□□□ -0.85
LDLR-214ENST00000560628 ADCK2Q7Z695 626 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 CUZD1Q86UP6 607 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 PPIL6Q8IXY8 311 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.74□□□□□ -0.85
LDLR-214ENST00000560628 OR11G2Q8NGC1 345 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 CD200R1Q8TD46 325 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 CALML6Q8TD86 181 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 GRK7Q8WTQ7 553 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 TM9SF4Q92544 642 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 KCNJ9Q92806 393 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 NACC2Q96BF6 587 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 C8orf44Q96CB5 159 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 THOC3Q96J01 351 aaKnown RBP9.74□□□□□ -0.85
LDLR-214ENST00000560628 AGAP4Q96P64 663 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 OR2A5Q96R48 311 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 NDNQ99608 321 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 AARSD1Q9BTE6 412 aaKnown RBP9.74□□□□□ -0.85
LDLR-214ENST00000560628 SLC29A3Q9BZD2 475 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 CUEDC1Q9NWM3 386 aaPredicted RBP9.74□□□□□ -0.85
LDLR-214ENST00000560628 KLHL42Q9P2K6 505 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 TRPC4Q9UBN4 977 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 ZNF282Q9UDV7 671 aaPredicted RBP9.74□□□□□ -0.85
LDLR-214ENST00000560628 PCYOX1Q9UHG3 505 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 C3orf18Q9UK00 162 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 CDC14AQ9UNH5 594 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 COPG1Q9Y678 874 aaKnown RBP9.74□□□□□ -0.85
LDLR-214ENST00000560628 ESPL1Q14674 2120 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 SHANK1Q9Y566 2161 aa9.74□□□□□ -0.85
LDLR-214ENST00000560628 RP1L1Q8IWN7 2480 aaPredicted RBP9.74□□□□□ -0.85
LDLR-214ENST00000560628 A0A0A6YYC8 382 aaPredicted RBP9.73□□□□□ -0.85
LDLR-214ENST00000560628 ZNF839A8K0R7 811 aa9.73□□□□□ -0.85
LDLR-214ENST00000560628 H7BY64 318 aa9.73□□□□□ -0.85
LDLR-214ENST00000560628 I3L1I5 382 aaPredicted RBP9.73□□□□□ -0.85
LDLR-214ENST00000560628 HAT1O14929 419 aa9.73□□□□□ -0.85
LDLR-214ENST00000560628 VPS26AO75436 327 aa9.73□□□□□ -0.85
LDLR-214ENST00000560628 CCNDBP1O95273 360 aa9.73□□□□□ -0.85
LDLR-214ENST00000560628 RNF224P0DH78 156 aa9.73□□□□□ -0.85
LDLR-214ENST00000560628 ENO3P13929 434 aaPredicted RBP9.73□□□□□ -0.85
LDLR-214ENST00000560628 CARSP49589 748 aaKnown RBP9.73□□□□□ -0.85
LDLR-214ENST00000560628 EMP2P54851 167 aa9.73□□□□□ -0.85
LDLR-214ENST00000560628 SYT16Q17RD7 645 aa9.73□□□□□ -0.85
LDLR-214ENST00000560628 CRB2Q5IJ48 1285 aa9.73□□□□□ -0.85
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