RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ASZ1Q8WWH4 475 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 RAB11FIP5Q9BXF6 653 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 INTS9Q9NV88 658 aaKnown RBP13.04□□□□□ -0.32
SMAD3-214ENST00000560402 PIH1D1Q9NWS0 290 aaKnown RBP13.04□□□□□ -0.32
SMAD3-214ENST00000560402 SAMD15Q9P1V8 674 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 PLEKHB1Q9UF11 243 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-214ENST00000560402 TEX264Q9Y6I9 313 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 UNC79Q9P2D8 2635 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 UTP20O75691 2785 aaKnown RBP13.03□□□□□ -0.32
SMAD3-214ENST00000560402 TCRBV7S3A2A0A539 114 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 SDR42E2A6NKP2 422 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 APOA4P06727 396 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 TPBGLP0DKB5 382 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 PIM1P11309 404 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-214ENST00000560402 ADRA1DP25100 572 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 LSP1P33241 339 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 GCGRP47871 477 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 PRAMEP78395 509 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 NAB1Q13506 487 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 FASTKD3Q14CZ7 662 aaKnown RBP13.03□□□□□ -0.32
SMAD3-214ENST00000560402 CYP2A13Q16696 494 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 FASTKD1Q53R41 847 aaKnown RBP13.03□□□□□ -0.32
SMAD3-214ENST00000560402 TNFAIP8L3Q5GJ75 292 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 HP1BP3Q5SSJ5 553 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-214ENST00000560402 C1orf189Q5VU69 101 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 LRRC8BQ6P9F7 803 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 MICALCLQ6ZW33 695 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 ZNF655Q8N720 491 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-214ENST00000560402 OR4L1Q8NH43 312 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 FBF1Q8TES7 1133 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 CDKL2Q92772 493 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 HDAC10Q969S8 669 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 ALKBH8Q96BT7 664 aaKnown RBP13.03□□□□□ -0.32
SMAD3-214ENST00000560402 PTERQ96BW5 349 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 CFAP36Q96G28 342 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 SMC6Q96SB8 1091 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 MFRPQ9BY79 579 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 SPRTNQ9H040 489 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-214ENST00000560402 NSRP1Q9H0G5 558 aaKnown RBP13.03□□□□□ -0.32
SMAD3-214ENST00000560402 ENAMQ9NRM1 1142 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 P4HTMQ9NXG6 502 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 EURLQ9NYK6 297 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 DHCR7Q9UBM7 475 aaKnown RBP13.03□□□□□ -0.32
SMAD3-214ENST00000560402 B3GNT3Q9Y2A9 372 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 TCAF1Q9Y4C2 921 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 MAD1L1Q9Y6D9 718 aa13.03□□□□□ -0.32
SMAD3-214ENST00000560402 A0A1B0GX78 115 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 TCP11X1B4DZS4 312 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 OR1I1O60431 355 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 GPC4O75487 556 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 ONECUT2O95948 504 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 ALBP02768 609 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 MAGP20916 626 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 SSTR1P30872 391 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 TTPAP49638 278 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 C4orf17Q53FE4 359 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 PRR30Q53SZ7 412 aaPredicted RBP13.02□□□□□ -0.33
SMAD3-214ENST00000560402 ZC3H12BQ5HYM0 836 aaKnown RBP13.02□□□□□ -0.33
SMAD3-214ENST00000560402 TCTE1Q5JU00 501 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 CASC4Q6P4E1 433 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 PPP1R32Q7Z5V6 425 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 MPP5Q8N3R9 675 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 PPHLN1Q8NEY8 458 aaKnown RBP13.02□□□□□ -0.33
SMAD3-214ENST00000560402 OR2L8Q8NGY9 312 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 GSDMBQ8TAX9 411 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 VPS50Q96JG6 964 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 PANX3Q96QZ0 392 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 EBNA1BP2Q99848 306 aaKnown RBP13.02□□□□□ -0.33
SMAD3-214ENST00000560402 MENTQ9BUN1 341 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 WDR54Q9H977 334 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 MRM3Q9HC36 420 aaKnown RBP13.02□□□□□ -0.33
SMAD3-214ENST00000560402 KCNK9Q9NPC2 374 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 CASS4Q9NQ75 786 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 BFARQ9NZS9 450 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 MAP10Q9P2G4 905 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 TBK1Q9UHD2 729 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 NXT1Q9UKK6 140 aaKnown RBP13.02□□□□□ -0.33
SMAD3-214ENST00000560402 PLAGL1Q9UM63 463 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 CDYLQ9Y232 598 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 DOPEY1Q5JWR5 2465 aa13.02□□□□□ -0.33
SMAD3-214ENST00000560402 NDUFAB1O14561 156 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 PRMT5O14744 637 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-214ENST00000560402 KPNA5O15131 536 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 HCRTR1O43613 425 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 UMODP07911 640 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 PGAM1P18669 254 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 CD9P21926 228 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 CCR7P32248 378 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 MAGEA3P43357 314 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 SERPINB9P50453 376 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 GPX6P59796 221 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 GUCY1A3Q02108 690 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 HSPA14Q0VDF9 509 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 AIMP2Q13155 320 aaKnown RBP13.01□□□□□ -0.33
SMAD3-214ENST00000560402 RAPSNQ13702 412 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 NAA25Q14CX7 972 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 MSS51Q4VC12 460 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 ARMC3Q5W041 872 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 TTC23LQ6PF05 361 aa13.01□□□□□ -0.33
SMAD3-214ENST00000560402 NAPRTQ6XQN6 538 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms