RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 DUSP3P51452 185 aaPredicted RBP10.05□□□□□ -0.8
TPM1-221ENST00000559831 EPHA4P54764 986 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 FOXA1P55317 472 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 MEF2AQ02078 507 aaPredicted RBP10.05□□□□□ -0.8
TPM1-221ENST00000559831 PRDX1Q06830 199 aaKnown RBP10.05□□□□□ -0.8
TPM1-221ENST00000559831 DOC2AQ14183 400 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 SLBPQ14493 270 aaKnown RBP eCLIP10.05□□□□□ -0.8
TPM1-221ENST00000559831 PDCD2Q16342 344 aaPredicted RBP10.05□□□□□ -0.8
TPM1-221ENST00000559831 CPSF6Q16630 551 aaKnown RBP eCLIP10.05□□□□□ -0.8
TPM1-221ENST00000559831 PROX2Q3B8N5 592 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 SGO1Q5FBB7 561 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 TCHHL1Q5QJ38 904 aaPredicted RBP10.05□□□□□ -0.8
TPM1-221ENST00000559831 PERM1Q5SV97 790 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 PRAMEF9Q5VWM5 478 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 KIAA1614Q5VZ46 1190 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 ATG9BQ674R7 924 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 SPESP1Q6UW49 350 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 SLCO4C1Q6ZQN7 724 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 CPLX4Q7Z7G2 160 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 OR2L3Q8NG85 312 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 IFI44Q8TCB0 444 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 METTL6Q8TCB7 284 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 NCSTNQ92542 709 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 NAT6Q93015 286 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 GRAMD1AQ96CP6 724 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 OR2A14Q96R47 310 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 NTMT1Q9BV86 223 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 ABCG4Q9H172 646 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 EPN3Q9H201 632 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 PELI2Q9HAT8 420 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 NPHS2Q9NP85 383 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 SLC6A20Q9NP91 592 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 FTSJ1Q9UET6 329 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 TRPS1Q9UHF7 1281 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 ZNF225Q9UK10 706 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.05□□□□□ -0.8
TPM1-221ENST00000559831 KLHL20Q9Y2M5 609 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 TRAF6Q9Y4K3 522 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 TIMM22Q9Y584 194 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 ENTPD2Q9Y5L3 495 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 OTOGLQ3ZCN5 2332 aa10.05□□□□□ -0.8
TPM1-221ENST00000559831 IGHV1OR21-1A0A087WYE8 117 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 A0A0J9YY10 115 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 H7BY64 318 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 MATN2O00339 956 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 ZW10O43264 779 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 B4GAT1O43505 415 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 SH3BP5O60239 455 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 SKAP2O75563 359 aaPredicted RBP10.04□□□□□ -0.8
TPM1-221ENST00000559831 CHEK2O96017 543 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 ENO1P06733 434 aaKnown RBP10.04□□□□□ -0.8
TPM1-221ENST00000559831 TROVE2P10155 538 aaKnown RBP eCLIP10.04□□□□□ -0.8
TPM1-221ENST00000559831 UROSP10746 265 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 PCNAP12004 261 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 CKMT1AP12532 417 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 CD59P13987 128 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 JUPP14923 745 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 PVRP15151 417 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 CDH3P22223 829 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 CCR8P51685 355 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 ABATP80404 500 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 NR1D2Q14995 579 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 ZRSR2Q15696 482 aaKnown RBP10.04□□□□□ -0.8
TPM1-221ENST00000559831 HIST2H2ACQ16777 129 aaPredicted RBP10.04□□□□□ -0.8
TPM1-221ENST00000559831 SLC5A12Q1EHB4 618 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 GGTA1PQ4G0N0 100 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 LIPJQ5W064 366 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 KANK2Q63ZY3 851 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 HIST2H2AA3Q6FI13 130 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 GRHL2Q6ISB3 625 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 CGB2Q6NT52 195 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 SCIMPQ6UWF3 145 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 FAM92BQ6ZTR7 304 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 SPRED1Q7Z699 444 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 NAXDQ8IW45 347 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 CLYBLQ8N0X4 340 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 L3MBTL4Q8NA19 623 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 FLVCR1-AS1Q8TAF5 88 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 PIWIL2Q8TC59 973 aaKnown RBP10.04□□□□□ -0.8
TPM1-221ENST00000559831 PTCD3Q96EY7 689 aaKnown RBP10.04□□□□□ -0.8
TPM1-221ENST00000559831 PPP1R36Q96LQ0 422 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 MAGEB10Q96LZ2 347 aaPredicted RBP10.04□□□□□ -0.8
TPM1-221ENST00000559831 PPM1MQ96MI6 270 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 PRAP1Q96NZ9 151 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 TGM7Q96PF1 710 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 PHOX2BQ99453 314 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 ELAC2Q9BQ52 826 aaKnown RBP10.04□□□□□ -0.8
TPM1-221ENST00000559831 CCDC3Q9BQI4 270 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 DPH7Q9BTV6 452 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 TRIM55Q9BYV6 548 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 SLC29A3Q9BZD2 475 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 KLHL25Q9H0H3 589 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 KLHL3Q9UH77 587 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 HAO1Q9UJM8 370 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 DCTN4Q9UJW0 460 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 POMT2Q9UKY4 750 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 BTRCQ9Y297 605 aa10.04□□□□□ -0.8
TPM1-221ENST00000559831 KCNE1BA0A087WTH5 132 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 FEZF1A0PJY2 475 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 EME2A4GXA9 379 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms