RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 IP6K3Q96PC2 410 aa12.05□□□□□ -0.48
LRRC28-214ENST00000559433 ZFYVE21Q9BQ24 234 aa12.05□□□□□ -0.48
LRRC28-214ENST00000559433 PLCD4Q9BRC7 762 aa12.05□□□□□ -0.48
LRRC28-214ENST00000559433 ERP44Q9BS26 406 aa12.05□□□□□ -0.48
LRRC28-214ENST00000559433 SLC25A23Q9BV35 468 aa12.05□□□□□ -0.48
LRRC28-214ENST00000559433 TRIM4Q9C037 500 aa12.05□□□□□ -0.48
LRRC28-214ENST00000559433 CLMPQ9H6B4 373 aa12.05□□□□□ -0.48
LRRC28-214ENST00000559433 UTP6Q9NYH9 597 aaKnown RBP12.05□□□□□ -0.48
LRRC28-214ENST00000559433 WHRNQ9P202 907 aa12.05□□□□□ -0.48
LRRC28-214ENST00000559433 ANKMY1Q9P2S6 941 aa12.05□□□□□ -0.48
LRRC28-214ENST00000559433 ADAMTS6Q9UKP5 1117 aa12.05□□□□□ -0.48
LRRC28-214ENST00000559433 CORO1CQ9ULV4 474 aaPredicted RBP12.05□□□□□ -0.48
LRRC28-214ENST00000559433 PTRH2Q9Y3E5 179 aaKnown RBP12.05□□□□□ -0.48
LRRC28-214ENST00000559433 PCSK5Q92824 1860 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 LOC105369274A0A096LPK9 316 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 IGKV1-8A0A0C4DH67 115 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 LOC102723532A0A0G2JNH3 316 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 HYKKA2RU49 373 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 FITM1A5D6W6 292 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 HAX1O00165 279 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 SRPX2O60687 465 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-214ENST00000559433 KLF7O75840 302 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-214ENST00000559433 ZIC2O95409 532 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-214ENST00000559433 IGHEP01854 428 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 EIF2S1P05198 315 aaKnown RBP12.04□□□□□ -0.48
LRRC28-214ENST00000559433 NR1D1P20393 614 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 ITGAXP20702 1163 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 FDXRP22570 491 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 IMPA1P29218 277 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 PGDP52209 483 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 IL2P60568 153 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 TLE1Q04724 770 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 PRDX1Q06830 199 aaKnown RBP12.04□□□□□ -0.48
LRRC28-214ENST00000559433 MGAT5Q09328 741 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 ATP1A4Q13733 1029 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 SSPNQ14714 243 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 FAM45BPQ6NSW5 357 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 MRPL14Q6P1L8 145 aaKnown RBP12.04□□□□□ -0.48
LRRC28-214ENST00000559433 MED25Q71SY5 747 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 ADCK2Q7Z695 626 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 PAQR7Q86WK9 346 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 OR4N4Q8N0Y3 316 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 METTL27Q8N6F8 245 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-214ENST00000559433 FAM45AQ8TCE6 357 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 CCDC138Q96M89 665 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 PARVBQ9HBI1 364 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 CCDC177Q9NQR7 707 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-214ENST00000559433 ENAMQ9NRM1 1142 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 STOX2Q9P2F5 926 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-214ENST00000559433 PDE10AQ9Y233 779 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 VWA7Q9Y334 891 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 PSAT1Q9Y617 370 aa12.04□□□□□ -0.48
LRRC28-214ENST00000559433 PABPN1LA6NDY0 278 aaKnown RBP12.03□□□□□ -0.48
LRRC28-214ENST00000559433 A6NL46 340 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 H0YGG7 62 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 SLC16A5O15375 505 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 CNOT3O75175 753 aaKnown RBP12.03□□□□□ -0.48
LRRC28-214ENST00000559433 EZRP15311 586 aaKnown RBP12.03□□□□□ -0.48
LRRC28-214ENST00000559433 CASRP41180 1078 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 PGGT1BP53609 377 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 FOXL2P58012 376 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 ARF3P61204 181 aaPredicted RBP12.03□□□□□ -0.48
LRRC28-214ENST00000559433 TBPL1P62380 186 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 ABATP80404 500 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 PRAMEF13Q5VWM6 474 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 DUPD1Q68J44 220 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 FBXO42Q6P3S6 717 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 MBOAT1Q6ZNC8 495 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 STRA8Q7Z7C7 330 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 MRGPREQ86SM8 312 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 LRRC56Q8IYG6 542 aaPredicted RBP12.03□□□□□ -0.48
LRRC28-214ENST00000559433 TMEM102Q8N9M5 508 aaPredicted RBP12.03□□□□□ -0.48
LRRC28-214ENST00000559433 OR2Y1Q8NGV0 311 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 PYROXD1Q8WU10 500 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.03□□□□□ -0.48
LRRC28-214ENST00000559433 RERGQ96A58 199 aaPredicted RBP12.03□□□□□ -0.48
LRRC28-214ENST00000559433 FKBP10Q96AY3 582 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 PTERQ96BW5 349 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 FER1L6-AS2Q96M78 137 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 OLFM1Q99784 485 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 SAYSD1Q9NPB0 183 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 SLC22A11Q9NSA0 550 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 MOCS1Q9NZB8 636 aa12.03□□□□□ -0.48
LRRC28-214ENST00000559433 UTP11Q9Y3A2 253 aaKnown RBP12.03□□□□□ -0.48
LRRC28-214ENST00000559433 K7EM74 188 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 HAT1O14929 419 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 KLHL41O60662 606 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 MED26O95402 600 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 TSPAN12O95859 305 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 HIST1H2AGP0C0S8 130 aaPredicted RBP12.02□□□□□ -0.49
LRRC28-214ENST00000559433 HIST1H2ADP20671 130 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 SAT1P21673 171 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 OR1D4P47884 311 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 CKAP4Q07065 602 aaKnown RBP12.02□□□□□ -0.49
LRRC28-214ENST00000559433 PHKG1Q16816 387 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 ZNF425Q6IV72 752 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 COX15Q7KZN9 410 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 OVCH1Q7RTY7 1134 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 SLC26A11Q86WA9 606 aa12.02□□□□□ -0.49
LRRC28-214ENST00000559433 ZC3HC1Q86WB0 502 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms