RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ERMP1Q7Z2K6 904 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 EXOC3L1Q86VI1 746 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 TMEM151BQ8IW70 566 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 OR4N4Q8N0Y3 316 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 FBXO39Q8N4B4 442 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 PTGR2Q8N8N7 351 aaPredicted RBP10.46□□□□□ -0.73
TPM1-217ENST00000559108 SLC38A9Q8NBW4 561 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 WDR36Q8NI36 951 aaKnown RBP10.46□□□□□ -0.73
TPM1-217ENST00000559108 USP7Q93009 1102 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 ARL8AQ96BM9 186 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 SCYL1Q96KG9 808 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 HIST1H2AHQ96KK5 128 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 NSUN5Q96P11 429 aaKnown RBP10.46□□□□□ -0.73
TPM1-217ENST00000559108 OR6C1Q96RD1 312 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 HIST1H2AJQ99878 128 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 H2AFJQ9BTM1 129 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 SPRY4Q9C004 299 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 SPRTNQ9H040 489 aaPredicted RBP10.46□□□□□ -0.73
TPM1-217ENST00000559108 POLR1BQ9H9Y6 1135 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 WWOXQ9NZC7 414 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 PCDHGA8Q9Y5G5 932 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 B3GALT1Q9Y5Z6 326 aa10.46□□□□□ -0.73
TPM1-217ENST00000559108 CCDC88CQ9P219 2028 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 FEZF1A0PJY2 475 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 E7EQ34 232 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 H7BY64 318 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 P2RX6O15547 441 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 TLX3O43711 291 aaPredicted RBP10.45□□□□□ -0.74
TPM1-217ENST00000559108 LCMT2O60294 686 aaKnown RBP10.45□□□□□ -0.74
TPM1-217ENST00000559108 CSTF2P33240 577 aaKnown RBP eCLIP10.45□□□□□ -0.74
TPM1-217ENST00000559108 CRHR1P34998 444 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 HSD17B2P37059 387 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 CCR10P46092 362 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 TUBB3Q13509 450 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 TSNAXIP1Q2TAA8 658 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 CDKL4Q5MAI5 379 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 CES4AQ5XG92 561 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 SULT1C3Q6IMI6 304 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 CAPN13Q6MZZ7 669 aaPredicted RBP10.45□□□□□ -0.74
TPM1-217ENST00000559108 ATG14Q6ZNE5 492 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 VN1R4Q7Z5H5 301 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 KMT5CQ86Y97 462 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 APOPT1Q96IL0 206 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 CABS1Q96KC9 395 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 SLC46A1Q96NT5 459 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 PRAP1Q96NZ9 151 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 CMKLR1Q99788 373 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 MRPL57Q9BQC6 102 aaKnown RBP10.45□□□□□ -0.74
TPM1-217ENST00000559108 PLCD4Q9BRC7 762 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 TRIM54Q9BYV2 358 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 CD244Q9BZW8 370 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 STRADBQ9C0K7 418 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 NRSN2Q9GZP1 204 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 AICDAQ9GZX7 198 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 MRPL46Q9H2W6 279 aaKnown RBP10.45□□□□□ -0.74
TPM1-217ENST00000559108 AKIRIN1Q9H9L7 192 aaPredicted RBP10.45□□□□□ -0.74
TPM1-217ENST00000559108 ZBTB26Q9HCK0 441 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 MRPS30Q9NP92 439 aaKnown RBP10.45□□□□□ -0.74
TPM1-217ENST00000559108 FGF21Q9NSA1 209 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 STARD5Q9NSY2 213 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 SOHLH2Q9NX45 425 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 MKS1Q9NXB0 559 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 ANGPTL2Q9UKU9 493 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 FREM2Q5SZK8 3169 aa10.45□□□□□ -0.74
TPM1-217ENST00000559108 PCSK5Q92824 1860 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 CELSR3Q9NYQ7 3312 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 APC2O95996 2303 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 A0A0J9YVX5 310 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 TAF4O00268 1085 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 E2F3O00716 465 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 OR7A17O14581 309 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 KDM1AO60341 852 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 GLRA3O75311 464 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 DXOO77932 396 aaKnown RBP10.44□□□□□ -0.74
TPM1-217ENST00000559108 TBX6O95947 436 aaPredicted RBP10.44□□□□□ -0.74
TPM1-217ENST00000559108 RPS17P08708 135 aaKnown RBP10.44□□□□□ -0.74
TPM1-217ENST00000559108 RBP1P09455 135 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 FGF5P12034 268 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 TSPAN8P19075 237 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 ITGAXP20702 1163 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 EEF1DP29692 281 aaKnown RBP10.44□□□□□ -0.74
TPM1-217ENST00000559108 CMPK1P30085 196 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 BCL6P41182 706 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 MLLT3P42568 568 aaPredicted RBP10.44□□□□□ -0.74
TPM1-217ENST00000559108 HNMTP50135 292 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 ALDH18A1P54886 795 aaKnown RBP10.44□□□□□ -0.74
TPM1-217ENST00000559108 FOXM1Q08050 763 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 CYP4F3Q08477 520 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 SRSF6Q13247 344 aaKnown RBP10.44□□□□□ -0.74
TPM1-217ENST00000559108 PCLAFQ15004 111 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 THEMIS2Q5TEJ8 643 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 PWWP2BQ6NUJ5 590 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 IGF2-ASQ6U949 168 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 SLCO4C1Q6ZQN7 724 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 TIPARPQ7Z3E1 657 aaKnown RBP10.44□□□□□ -0.74
TPM1-217ENST00000559108 VN1R5Q7Z5H4 357 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 TMPRSS11BQ86T26 416 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 ZFAND4Q86XD8 727 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 CARFQ8N187 725 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 ARHGEF39Q8N4T4 335 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms