RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 KCTD6Q8NC69 237 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 IPMKQ8NFU5 416 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 OR5M9Q8NGP3 310 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 OR10Q1Q8NGQ4 319 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 OR13C4Q8NGS5 318 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 Q96MF0 132 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 SRPK1Q96SB4 655 aaKnown RBP11.19□□□□□ -0.62
SMAD3-206ENST00000558739 OLFM1Q99784 485 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 VN1R1Q9GZP7 353 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 KCNK13Q9HB14 408 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 PNPLA3Q9NST1 481 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-206ENST00000558739 FAM215AQ9Y5M1 114 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 PRSS21Q9Y6M0 314 aa11.19□□□□□ -0.62
SMAD3-206ENST00000558739 IGLV3-16A0A075B6K0 115 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 CRLF1O75462 422 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 ICAM2P13598 275 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 FERP16591 822 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 TFEBP19484 476 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 PTPN3P26045 913 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 UQCRC1P31930 480 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 PIGHQ14442 188 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-206ENST00000558739 GRB7Q14451 532 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 MEP1AQ16819 746 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 FLYWCH1Q4VC44 716 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 ZC3H12BQ5HYM0 836 aaKnown RBP11.18□□□□□ -0.62
SMAD3-206ENST00000558739 RTL6Q6ICC9 239 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 WDR53Q7Z5U6 358 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-206ENST00000558739 TBC1D21Q8IYX1 336 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 FAM98AQ8NCA5 519 aaKnown RBP11.18□□□□□ -0.62
SMAD3-206ENST00000558739 SIMC1Q8NDZ2 872 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 OR52N2Q8NGI0 321 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 CABS1Q96KC9 395 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 ZNF830Q96NB3 372 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-206ENST00000558739 OLFM3Q96PB7 478 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 COPS8Q99627 209 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 C14orf105Q9NVL8 296 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 FAM153AQ9UHL3 310 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 ANAPC7Q9UJX3 599 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 EDARQ9UNE0 448 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 NOTCH1P46531 2555 aa11.18□□□□□ -0.62
SMAD3-206ENST00000558739 A0A0U1RQJ8 604 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 USP27XA6NNY8 438 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 AP2A1O95782 977 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 GLI4P10075 376 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 RALBP11234 206 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 SLC26A3P40879 764 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 CSE1LP55060 971 aaKnown RBP11.17□□□□□ -0.62
SMAD3-206ENST00000558739 CBLBQ13191 982 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 POU4F3Q15319 338 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 SF1Q15637 639 aaKnown RBP11.17□□□□□ -0.62
SMAD3-206ENST00000558739 HKDC1Q2TB90 917 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 FKBP15Q5T1M5 1219 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 CDKAL1Q5VV42 579 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 SHEQ5VZ18 495 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 ACAD11Q709F0 780 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 KIF2BQ8N4N8 673 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 MYRIPQ8NFW9 859 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 RAPGEF5Q92565 580 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 SLC6A16Q9GZN6 736 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 ATG10Q9H0Y0 220 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 HAUS4Q9H6D7 363 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 PLSCR2Q9NRY7 297 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 HACD3Q9P035 362 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 VPS9D1Q9Y2B5 631 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 SCN3AQ9NY46 2000 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 KIAA1549Q9HCM3 1950 aa11.17□□□□□ -0.62
SMAD3-206ENST00000558739 ARHGAP21Q5T5U3 1957 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 A0A0A6YYC8 382 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-206ENST00000558739 NPIPA2E9PIF3 369 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 NPIPA3F8WFD2 350 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 I3L1I5 382 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-206ENST00000558739 PRMT3O60678 531 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 SUN1O94901 812 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 CD9P21926 228 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 TACR1P25103 407 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 ZFP36L2P47974 494 aaKnown RBP11.16□□□□□ -0.62
SMAD3-206ENST00000558739 AP2B1P63010 937 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 KRTAP1-1Q07627 177 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 WASHC5Q12768 1159 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 MUM1Q2TAK8 710 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 PRTGQ2VWP7 1150 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 TEX44Q53QW1 395 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 FIGNQ5HY92 759 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 FBXW10Q5XX13 1052 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 HMBOX1Q6NT76 420 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 RNF44Q7L0R7 432 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 CPEB2Q7Z5Q1 589 aaKnown RBP11.16□□□□□ -0.62
SMAD3-206ENST00000558739 ELMO1Q92556 727 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 MMABQ96EY8 250 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-206ENST00000558739 TEKT5Q96M29 485 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 MIPEPQ99797 713 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 APOL2Q9BQE5 337 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 TTYH2Q9BSA4 534 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 FICDQ9BVA6 458 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 TGIF2Q9GZN2 237 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 DEFB127Q9H1M4 99 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 MRPL47Q9HD33 250 aaKnown RBP11.16□□□□□ -0.62
SMAD3-206ENST00000558739 POLG2Q9UHN1 485 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 RUVBL1Q9Y265 456 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms