RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 SAGP10523 405 aaPredicted RBP2.86□□□□□ -1.95
SPG11-206ENST00000558093 HLA-FP30511 346 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 LHX1P48742 406 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 ASCL1P50553 236 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 VAMP7P51809 220 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 GSCP56915 257 aaPredicted RBP2.86□□□□□ -1.95
SPG11-206ENST00000558093 DSCR10P59022 87 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 TRAP1Q12931 704 aaKnown RBP2.86□□□□□ -1.95
SPG11-206ENST00000558093 PRPF4BQ13523 1007 aaKnown RBP2.86□□□□□ -1.95
SPG11-206ENST00000558093 ITGA7Q13683 1181 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 ALCAMQ13740 583 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 PTPRCAPQ14761 206 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 EFTUD2Q15029 972 aaKnown RBP eCLIP2.86□□□□□ -1.95
SPG11-206ENST00000558093 MTHFSDQ2M296 383 aaKnown RBP2.86□□□□□ -1.95
SPG11-206ENST00000558093 VWC2Q2TAL6 325 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 SNAI3Q3KNW1 292 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 GLIPR1L2Q4G1C9 344 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 C9orf152Q5JTZ5 239 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 OR4A47Q6IF82 309 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 CFAP161Q6P656 301 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 CASC1Q6TDU7 716 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 FAM198BQ6UWH4 519 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 KIF6Q6ZMV9 814 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 CHMP1BQ7LBR1 199 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 SPEM1Q8N4L4 309 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 NOA1Q8NC60 698 aaKnown RBP2.86□□□□□ -1.95
SPG11-206ENST00000558093 NUP37Q8NFH4 326 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 OR7A2PQ8NGA2 310 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 APOBEC4Q8WW27 367 aaKnown RBP2.86□□□□□ -1.95
SPG11-206ENST00000558093 OMA1Q96E52 524 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 SPAG5Q96R06 1193 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 EGFL8Q99944 293 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 CCDC3Q9BQI4 270 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 TLE6Q9H808 572 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 MED20Q9H944 212 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 CDH20Q9HBT6 801 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 MUTYHQ9UIF7 546 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 MEX3AA1L020 520 aaKnown RBP2.85□□□□□ -1.95
SPG11-206ENST00000558093 SYNDIG1LA6NDD5 238 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 SNURFLB1AK76 121 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 H0YAE9 185 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 VTNP04004 478 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 LDHCP07864 332 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 NR2F1P10589 423 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 CD22P20273 847 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 AZGP1P25311 298 aaKnown RBP2.85□□□□□ -1.95
SPG11-206ENST00000558093 MC5RP33032 325 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 XGP55808 180 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 IFI35P80217 286 aaPredicted RBP2.85□□□□□ -1.95
SPG11-206ENST00000558093 POU5F1Q01860 360 aaKnown RBP2.85□□□□□ -1.95
SPG11-206ENST00000558093 ELAVL2Q12926 359 aaKnown RBP2.85□□□□□ -1.95
SPG11-206ENST00000558093 SGCGQ13326 291 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 CDH18Q13634 790 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 TMEM266Q2M3C6 531 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 MOGAT2Q3SYC2 334 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 CES4AQ5XG92 561 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 BRINP3Q76B58 766 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 ZER1Q7Z7L7 766 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 ATP8B4Q8TF62 1192 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 KCNE4Q8WWG9 221 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 METTL21AQ8WXB1 218 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 OTUB1Q96FW1 271 aaPredicted RBP2.85□□□□□ -1.95
SPG11-206ENST00000558093 CPNE1Q99829 537 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 B3GAT2Q9NPZ5 323 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 TXNDC16Q9P2K2 825 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 ZHX2Q9Y6X8 837 aa2.85□□□□□ -1.95
SPG11-206ENST00000558093 MYH14Q7Z406 1995 aaKnown RBP2.85□□□□□ -1.95
SPG11-206ENST00000558093 A0A087WUV0 522 aaPredicted RBP2.84□□□□□ -1.95
SPG11-206ENST00000558093 A0A1W2PPM1 405 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 CLDN4O14493 209 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 TEX28O15482 410 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 TIMM44O43615 452 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 PI15O43692 258 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 SNX3O60493 162 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 TADA2AO75478 443 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 PSMD10O75832 226 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 ATP1B1P05026 303 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 ATP5BP06576 529 aaKnown RBP2.84□□□□□ -1.95
SPG11-206ENST00000558093 MYL6BP14649 208 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 GATA1P15976 413 aaPredicted RBP2.84□□□□□ -1.95
SPG11-206ENST00000558093 CETN2P41208 172 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 TMEM50BP56557 158 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 CALCOCO2Q13137 446 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 TRIM29Q14134 588 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 BECN1Q14457 450 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 TMEM132DQ14C87 1099 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 NPTX1Q15818 432 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 ARMC4Q5T2S8 1044 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 ERMARDQ5T6L9 678 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 MFSD4BQ5TF39 518 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 CTR9Q6PD62 1173 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 FCRLAQ7L513 359 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 PRPF39Q86UA1 669 aaKnown RBP2.84□□□□□ -1.95
SPG11-206ENST00000558093 MFN1Q8IWA4 741 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 METTL4Q8N3J2 472 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 Q8NBF4 154 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 AQP11Q8NBQ7 271 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 OR5T2Q8NGG2 359 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 OR2L2Q8NH16 312 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 PROX1Q92786 737 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms