RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CYP1B1Q16678 543 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 AGAP7PQ5VUJ5 663 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 KIRREL2Q6UWL6 708 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 DENND6AQ8IWF6 608 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 REXO1L1PQ8IX06 675 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 LMNTD2Q8IXW0 634 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 FBXO15Q8NCQ5 510 aaPredicted RBP13.52□□□□□ -0.25
SNX6-210ENST00000557341 GIMAP7Q8NHV1 300 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 STT3BQ8TCJ2 826 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 CALML6Q8TD86 181 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 PPP4R1Q8TF05 950 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 MIEF2Q96C03 454 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 MVB12AQ96EY5 273 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 CABS1Q96KC9 395 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 C10orf90Q96M02 699 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 AGAP4Q96P64 663 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 WDR77Q9BQA1 342 aaPredicted RBP13.52□□□□□ -0.25
SNX6-210ENST00000557341 PLCD4Q9BRC7 762 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 FBXO6Q9NRD1 293 aaPredicted RBP13.52□□□□□ -0.25
SNX6-210ENST00000557341 ASF1BQ9NVP2 202 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 KLHL42Q9P2K6 505 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 SCN3AQ9NY46 2000 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 ZGRF1Q86YA3 2104 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 DOPEY1Q5JWR5 2465 aa13.52□□□□□ -0.25
SNX6-210ENST00000557341 TEX15Q9BXT5 2789 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 UNC79Q9P2D8 2635 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 IGKV1-8A0A0C4DH67 115 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 H0YGG7 62 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 MAP2K7O14733 419 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 PRPF4O43172 522 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNX6-210ENST00000557341 KIF5CO60282 957 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 SEMA7AO75326 666 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 SLC16A8O95907 504 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 SYF2O95926 243 aaKnown RBP13.51□□□□□ -0.25
SNX6-210ENST00000557341 ZGLP1P0C6A0 271 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 MPC1LP0DKB6 136 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 EZRP15311 586 aaKnown RBP13.51□□□□□ -0.25
SNX6-210ENST00000557341 COILP38432 576 aaPredicted RBP13.51□□□□□ -0.25
SNX6-210ENST00000557341 MAGEA3P43357 314 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 ARF3P61204 181 aaPredicted RBP13.51□□□□□ -0.25
SNX6-210ENST00000557341 KLC1Q07866 573 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 CTBP1Q13363 440 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 NR6A1Q15406 480 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 LONRF1Q17RB8 773 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 PRTGQ2VWP7 1150 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 ICE2Q659A1 982 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 Q6ZS92 163 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 PAQR7Q86WK9 346 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 CSNK1A1LQ8N752 337 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 PPFIBP2Q8ND30 876 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 OR11G2Q8NGC1 345 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 GRK7Q8WTQ7 553 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 COG1Q8WTW3 980 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 INPP5DQ92835 1189 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 RERGQ96A58 199 aaPredicted RBP13.51□□□□□ -0.25
SNX6-210ENST00000557341 C19orf60Q96EN9 201 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 MS4A14Q96JA4 679 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 PKP4Q99569 1192 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 SLC30A3Q99726 388 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 LHPPQ9H008 270 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 EPS8L2Q9H6S3 715 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 ZBTB20Q9HC78 741 aaPredicted RBP13.51□□□□□ -0.25
SNX6-210ENST00000557341 C20orf96Q9NUD7 363 aaPredicted RBP13.51□□□□□ -0.25
SNX6-210ENST00000557341 CDC14AQ9UNH5 594 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 RUVBL1Q9Y265 456 aaKnown RBP13.51□□□□□ -0.25
SNX6-210ENST00000557341 PCDHGA10Q9Y5H3 936 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 MAD1L1Q9Y6D9 718 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 COMMD10Q9Y6G5 202 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 CRYBG3Q68DQ2 2970 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 SVILO95425 2214 aa13.51□□□□□ -0.25
SNX6-210ENST00000557341 IGLV3-12A0A075B6K2 115 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 GOLGA6L10A0A0M3HER8 536 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 SMAPO00193 183 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 HPP00738 406 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 F7P08709 466 aaPredicted RBP13.5□□□□□ -0.25
SNX6-210ENST00000557341 ACPPP15309 386 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 FNTAP49354 379 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 PRDX1Q06830 199 aaKnown RBP13.5□□□□□ -0.25
SNX6-210ENST00000557341 DSG2Q14126 1118 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 EIF2S3LQ2VIR3 472 aaKnown RBP13.5□□□□□ -0.25
SNX6-210ENST00000557341 ZNF425Q6IV72 752 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 FBXO42Q6P3S6 717 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 ZNF549Q6P9A3 640 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 IGFL2Q6UWQ7 119 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 ADCK2Q7Z695 626 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 CUZD1Q86UP6 607 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 PRSS58Q8IYP2 241 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 CISD2Q8N5K1 135 aaKnown RBP13.5□□□□□ -0.25
SNX6-210ENST00000557341 NAT8LQ8N9F0 302 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 PRR7Q8TB68 274 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 CD200R1Q8TD46 325 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 ZNF480Q8WV37 535 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 GPR21Q99679 349 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 FAM167BQ9BTA0 163 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 C14orf105Q9NVL8 296 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 PCYOX1Q9UHG3 505 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 C3orf18Q9UK00 162 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 NOVA2Q9UNW9 492 aaKnown RBP13.5□□□□□ -0.25
SNX6-210ENST00000557341 MED16Q9Y2X0 877 aa13.5□□□□□ -0.25
SNX6-210ENST00000557341 NEU2Q9Y3R4 380 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms