RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 GPSM1Q86YR5 675 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 RAVER1Q8IY67 606 aaKnown RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 PIANPQ8IYJ0 282 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CLYBLQ8N0X4 340 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 LSMEM2Q8N112 164 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CPSF7Q8N684 471 aaKnown RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 TEX9Q8N6V9 391 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ZNF781Q8N8C0 355 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 FAM98AQ8NCA5 519 aaKnown RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 VN1R2Q8NFZ6 395 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 OR10H5Q8NGA6 315 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 OR2A12Q8NGT7 310 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CEP70Q8NHQ1 597 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 WFDC5Q8TCV5 224 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 MAGEC3Q8TD91 643 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ACTRT2Q8TDY3 377 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ANKRD49Q8WVL7 239 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 SMARCD2Q92925 531 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 MCUR1Q96AQ8 359 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ULK4Q96C45 1275 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 TIFAQ96CG3 184 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ECHDC3Q96DC8 303 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 SGF29Q96ES7 293 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 MCCC1Q96RQ3 725 aaPredicted RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 CCT7Q99832 543 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CCDC106Q9BWC9 280 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 TBC1D10AQ9BXI6 508 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ERVK-6Q9BXR3 956 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 TM6SF2Q9BZW4 377 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 NMUR2Q9GZQ4 415 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 P2RY12Q9H244 342 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 C1orf21Q9H246 121 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 MS4A5Q9H3V2 200 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 POMKQ9H5K3 350 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ALG9Q9H6U8 611 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ASB8Q9H765 288 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ZMAT4Q9H898 229 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 BRD9Q9H8M2 597 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 SFXN1Q9H9B4 322 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 TRPV4Q9HBA0 871 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 BPIFA1Q9NP55 256 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 TCF7L2Q9NQB0 619 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ARL8BQ9NVJ2 186 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 DEC1Q9P2X7 70 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 DKK3Q9UBP4 350 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 B4GALT6Q9UBX8 382 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CDYLQ9Y232 598 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 SLC27A6Q9Y2P4 619 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 DHRS7Q9Y394 339 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 WNT6Q9Y6F9 365 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CITO14578 2027 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 TRBV5-4A0A0C4DH59 114 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 A8MT66 165 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 AGAP14A8MT82 685 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 PRR5-ARHGAP8B1AHC4 643 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 STX16-NPEPL1H3BU86 382 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 STX16O14662 325 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ZBTB14O43829 449 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 KLK8O60259 260 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 OR1I1O60431 355 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 MAGEC1O60732 1142 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 SNX2O60749 519 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 SUPT7LO94864 414 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 AP2A2O94973 939 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 SPDEFO95238 335 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CBX6O95503 412 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 PRAMEF12O95522 483 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 MLYCDO95822 493 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CHEK2O96017 543 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 S100BP04271 92 aaPredicted RBP4.36□□□□□ -1.71
SRP54-212ENST00000556992 CHRNGP07510 517 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 KRT16P08779 473 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ALPIP09923 528 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 JMJD7P0C870 316 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CBSLP0DN79 551 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CDK4P11802 303 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 GFAPP14136 432 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ZNF30P17039 623 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 BPIP17213 487 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CEBPBP17676 345 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 UGT1A6P19224 532 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 UGT1A1P22309 533 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 UGT1A4P22310 534 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CCND1P24385 295 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ARRB2P32121 409 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 GKP32189 559 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 UGT1A3P35503 534 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 UGT1A5P35504 534 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CBSP35520 551 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 PGM1P36871 562 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 SPAM1P38567 509 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 VIPR2P41587 438 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 NSG1P42857 185 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 AVPR1BP47901 424 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 STK19P49842 368 aaPredicted RBP4.36□□□□□ -1.71
SRP54-212ENST00000556992 GZMKP49863 264 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CDKN1CP49918 316 aaPredicted RBP4.36□□□□□ -1.71
SRP54-212ENST00000556992 CCNHP51946 323 aaPredicted RBP4.36□□□□□ -1.71
SRP54-212ENST00000556992 PGGT1BP53609 377 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 COPAP53621 1224 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms