RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PRPSAP2O60256 369 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 NME2P1O60361 137 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 MAFKO60675 156 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 NEURL1O76050 574 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 PDE9AO76083 593 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 MED26O95402 600 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 GNA14O95837 355 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 PEX11BO96011 259 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 MT-CYBP00156 380 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-245ENST00000556958 PRLP01236 227 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 PGRP06401 933 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 POLBP06746 335 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 CTSBP07858 339 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 TPH1P17752 444 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 GPD1P21695 349 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 NME2P22392 152 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 SOX5P35711 763 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 PRCPP42785 496 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 TAS2R50P59544 299 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 SORDQ00796 357 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 DEFA6Q01524 100 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 TNK1Q13470 666 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 FASTKQ14296 549 aaKnown RBP5.41□□□□□ -1.54
ATXN3-245ENST00000556958 POU4F3Q15319 338 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 CAMK4Q16566 473 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 ACKR1Q16570 336 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 BTBD16Q32M84 506 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 KHDC1Q4VXA5 237 aaKnown RBP5.41□□□□□ -1.54
ATXN3-245ENST00000556958 COBLL1Q53SF7 1204 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 CMPK2Q5EBM0 449 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 WIPI1Q5MNZ9 446 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-245ENST00000556958 ZDHHC20Q5W0Z9 365 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 PLAG1Q6DJT9 500 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 ZNF449Q6P9G9 518 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 TRIM65Q6PJ69 517 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 RFX8Q6ZV50 586 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 TRIM73Q86UV7 250 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 ADGRF3Q8IZF5 1079 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 OR2L2Q8NH16 312 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 C16orf52Q8NHV5 167 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 JOSD2Q8TAC2 188 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 LINC01560Q8TB33 94 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 METTL21AQ8WXB1 218 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 CPA5Q8WXQ8 436 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 DACH2Q96NX9 599 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 OR2A14Q96R47 310 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 SRPK1Q96SB4 655 aaKnown RBP5.41□□□□□ -1.54
ATXN3-245ENST00000556958 SELENOOQ9BVL4 669 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 YIPF2Q9BWQ6 316 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 TDRD1Q9BXT4 1180 aaKnown RBP5.41□□□□□ -1.54
ATXN3-245ENST00000556958 ADAM19Q9H013 955 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 MVB12BQ9H7P6 319 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 KCNK13Q9HB14 408 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 NT5MQ9NPB1 228 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 RMND1Q9NWS8 449 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATXN3-245ENST00000556958 CDC14AQ9UNH5 594 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 IGLV3-12A0A075B6K2 115 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 A0A087X1B8 175 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 OR2AG2A6NM03 316 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 FOXN3O00409 490 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-245ENST00000556958 KDM1AO60341 852 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 SRPX2O60687 465 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-245ENST00000556958 TMCC2O75069 709 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 WDR1O75083 606 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 FBXO24O75426 580 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 GABRA1P14867 456 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 UGT2B7P16662 529 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 EPHA1P21709 976 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 VAMP1P23763 118 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 PBLDP30039 288 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-245ENST00000556958 SHMT2P34897 504 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 HCAR3P49019 387 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 PTH2RP49190 550 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 CYB561P49447 251 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 ZNF143P52747 638 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-245ENST00000556958 TAP2Q03519 686 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 PCDH1Q08174 1060 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 STIM1Q13586 685 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 EXT1Q16394 746 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 ATP13A5Q4VNC0 1218 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 FNBP1LQ5T0N5 605 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 MEI1Q5TIA1 1274 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 NAA35Q5VZE5 725 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 FCRLBQ6BAA4 426 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 GJB7Q6PEY0 223 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 WDR59Q6PJI9 974 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 RGS9BPQ6ZS82 235 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 VN1R5Q7Z5H4 357 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 TMC3Q7Z5M5 1100 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 CRLF3Q8IUI8 442 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 CFAP206Q8IYR0 622 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 SMYD4Q8IYR2 804 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-245ENST00000556958 FAM71AQ8IYT1 594 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 ATPAF2Q8N5M1 289 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 NPWQ8N729 165 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 RASGEF1AQ8N9B8 481 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 OR52E1Q8NGJ3 308 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 OR5M9Q8NGP3 310 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 M1APQ8TC57 530 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms