RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 PCOLCEQ15113 449 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 LONRF1Q17RB8 773 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 PRTGQ2VWP7 1150 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 ZNF766Q5HY98 468 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 C11orf63Q6NUN7 778 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 AADACL2Q6P093 401 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 FBXO42Q6P3S6 717 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 TTC23LQ6PF05 361 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 NCCRP1Q6ZVX7 275 aaPredicted RBP8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 SPPL2CQ8IUH8 684 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 AMER3Q8N944 861 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 FAM71DQ8N9W8 422 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 OR2A1Q8NGT9 310 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 THAP3Q8WTV1 239 aaPredicted RBP8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 CHTF18Q8WVB6 975 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 SKA2Q8WVK7 121 aaPredicted RBP8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 HDAC10Q969S8 669 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 RAD51AP1Q96B01 352 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 C14orf79Q96F83 325 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 POM121Q96HA1 1249 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 IMMP1LQ96LU5 166 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 TTC1Q99614 292 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 ZFYVE21Q9BQ24 234 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 TSSK1BQ9BXA7 367 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 ZNF700Q9H0M5 742 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 SYNPO2LQ9H987 977 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 MCCC2Q9HCC0 563 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 C14orf105Q9NVL8 296 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 SLC2A6Q9UGQ3 507 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 TEKT2Q9UIF3 430 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 TTC7AQ9ULT0 858 aaPredicted RBP8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 CDC14AQ9UNH5 594 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 EFR3BQ9Y2G0 817 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 MEMO1Q9Y316 297 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 NFS1Q9Y697 457 aa8.57□□□□□ -1.04
HNRNPC-227ENST00000556897 GTF3C1Q12789 2109 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 IGHV3-20A0A0C4DH32 117 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 A0A1W2PPV9 198 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 OR2A25A4D2G3 310 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 RCCD1A6NED2 376 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 NPIPA5E9PKD4 350 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 C1orf105O95561 183 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 TPM1P09493 284 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 ICAM2P13598 275 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 AOAHP28039 575 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 CTNNA1P35221 906 aaKnown RBP8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 SLC26A3P40879 764 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 MAGEA1P43355 309 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 ST13P50502 369 aaKnown RBP8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 GDF10P55107 478 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 AP2B1P63010 937 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 FASTKQ14296 549 aaKnown RBP8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 TMED2Q15363 201 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 SYT16Q17RD7 645 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 HKDC1Q2TB90 917 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 P3H1Q32P28 736 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 FCRLBQ6BAA4 426 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 AFTPHQ6ULP2 937 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 ZNF534Q76KX8 674 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 LDB1Q86U70 411 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 ZC3H7AQ8IWR0 971 aaKnown RBP8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 BEST3Q8N1M1 668 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 RAB42Q8N4Z0 105 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 CSNK1A1LQ8N752 337 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 OR52K1Q8NGK4 314 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 OR6P1Q8NGX9 317 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 OR4L1Q8NH43 312 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 GSDMBQ8TAX9 411 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 HMGCLL1Q8TB92 370 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 MVB12AQ96EY5 273 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 MMABQ96EY8 250 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 ZNF778Q96MU6 729 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 GPR137Q96N19 417 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 SPOCK3Q9BQ16 436 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 DPH7Q9BTV6 452 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 ACAT2Q9BWD1 397 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 CARD6Q9BX69 1037 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 TGIF2Q9GZN2 237 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 MKKSQ9NPJ1 570 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 KLHL1Q9NR64 748 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 ANKRD10Q9NXR5 420 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 MKL2Q9ULH7 1088 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 NPIPA1Q9UND3 350 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 RUVBL1Q9Y265 456 aaKnown RBP8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 ZNF835Q9Y2P0 537 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 NEU2Q9Y3R4 380 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 PCDHA3Q9Y5H8 950 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 SCN2AQ99250 2005 aa8.56□□□□□ -1.04
HNRNPC-227ENST00000556897 A0A0A6YYC8 382 aaPredicted RBP8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 A0A0U1RQJ8 604 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 I3L1I5 382 aaPredicted RBP8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 TTI1O43156 1089 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 PRPF4O43172 522 aaKnown RBP eCLIP8.55□□□□□ -1.041e-7■□□□□ 8.5
HNRNPC-227ENST00000556897 ZNHIT1O43257 154 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 FOXS1O43638 330 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 SEC24DO94855 1032 aaPredicted RBP8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 TJP3O95049 919 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 ANXA5P08758 320 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 C8orf89P0DMQ9 161 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 PTPN7P35236 360 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms