RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 GBP5Q96PP8 586 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 RUFY1Q96T51 708 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 ZFYVE21Q9BQ24 234 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 SGPP1Q9BX95 441 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 FUT8Q9BYC5 575 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 ACTL8Q9H568 366 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 ABCF3Q9NUQ8 709 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 SNX7Q9UNH6 387 aa21.9■■□□□ 1.1
TDP1-216ENST00000556867 ATRXP46100 2492 aa21.89■■□□□ 1.1
TDP1-216ENST00000556867 A0A0J9YVX5 310 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 FITM1A5D6W6 292 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 NPEPPSL1A6NEC2 478 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 CDC7O00311 574 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 CREG1O75629 220 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 FAM155BO75949 473 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 RAB40ALP0C0E4 278 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 PRKAR1AP10644 381 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 STMN1P16949 149 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 PTPN4P29074 926 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 NAE1Q13564 534 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 GRM7Q14831 915 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 YOD1Q5VVQ6 348 aaPredicted RBP21.89■■□□□ 1.09
TDP1-216ENST00000556867 FRMPD2BQ6IN97 320 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 ADAMTSL2Q86TH1 951 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 ATL1Q8WXF7 558 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 MED8Q96G25 268 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 NLNQ9BYT8 704 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 DERL2Q9GZP9 239 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 ATG10Q9H0Y0 220 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 CDC42EP4Q9H3Q1 356 aaKnown RBP21.89■■□□□ 1.09
TDP1-216ENST00000556867 ACSS3Q9H6R3 686 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 TXLNGQ9NUQ3 528 aa21.89■■□□□ 1.09
TDP1-216ENST00000556867 CUEDC1Q9NWM3 386 aaPredicted RBP21.89■■□□□ 1.09
TDP1-216ENST00000556867 DHCR7Q9UBM7 475 aaKnown RBP21.89■■□□□ 1.09
TDP1-216ENST00000556867 FARSAQ9Y285 508 aaKnown RBP21.89■■□□□ 1.09
TDP1-216ENST00000556867 PHGDHO43175 533 aaKnown RBP21.88■■□□□ 1.09
TDP1-216ENST00000556867 CAPN1P07384 714 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 EZRP15311 586 aaKnown RBP21.88■■□□□ 1.09
TDP1-216ENST00000556867 AGXTP21549 392 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 HRH2P25021 359 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 ARSFP54793 590 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 VSX2P58304 361 aaPredicted RBP21.88■■□□□ 1.09
TDP1-216ENST00000556867 TBR1Q16650 682 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 ZXDCQ2QGD7 858 aaPredicted RBP21.88■■□□□ 1.09
TDP1-216ENST00000556867 UBAP2Q5T6F2 1119 aaKnown RBP21.88■■□□□ 1.09
TDP1-216ENST00000556867 FBXO42Q6P3S6 717 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 IFT20Q8IY31 132 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 OR56A3Q8NH54 315 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 CYTH2Q99418 400 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 C17orf62Q9BQA9 187 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 L2HGDHQ9H9P8 463 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 CTNNAL1Q9UBT7 734 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 OARD1Q9Y530 152 aa21.88■■□□□ 1.09
TDP1-216ENST00000556867 LOC105369274A0A096LPK9 316 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 LOC102723532A0A0G2JNH3 316 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 C9J4A7 227 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 RAB10P61026 200 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 CDKL1Q00532 357 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 NCF4Q15080 339 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 TAF1BQ53T94 588 aaPredicted RBP21.87■■□□□ 1.09
TDP1-216ENST00000556867 WASHC2DQ5SRD0 308 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 C1orf189Q5VU69 101 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 CAPN13Q6MZZ7 669 aaPredicted RBP21.87■■□□□ 1.09
TDP1-216ENST00000556867 C16orf46Q6P387 395 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 LCTLQ6UWM7 567 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 SYVN1Q86TM6 617 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 OR4N4Q8N0Y3 316 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 TTC29Q8NA56 475 aaPredicted RBP21.87■■□□□ 1.09
TDP1-216ENST00000556867 EXTL1Q92935 676 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 CUTCQ9NTM9 273 aa21.87■■□□□ 1.09
TDP1-216ENST00000556867 PIEZO2Q9H5I5 2752 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 A0A1B0GX78 115 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 TK2O00142 265 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 GUCA1CO95843 209 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 RPS18P62269 152 aaKnown RBP21.86■■□□□ 1.09
TDP1-216ENST00000556867 DCDP81605 110 aaKnown RBP21.86■■□□□ 1.09
TDP1-216ENST00000556867 SLMAPQ14BN4 828 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 TSNQ15631 228 aaKnown RBP21.86■■□□□ 1.09
TDP1-216ENST00000556867 LINC00303Q3SY05 128 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 ATP1A1-AS1Q5TC04 95 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 ADCK2Q7Z695 626 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 C17orf64Q86WR6 236 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 ENDOVQ8N8Q3 282 aaKnown RBP21.86■■□□□ 1.09
TDP1-216ENST00000556867 LRRN4CLQ8ND94 238 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 UBXN10Q96LJ8 280 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 OR2A5Q96R48 311 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 HAUS8Q9BT25 410 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 DHRS4Q9BTZ2 278 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 STARD5Q9NSY2 213 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 TMEM184CQ9NVA4 438 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 NFU1Q9UMS0 254 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 SH2B3Q9UQQ2 575 aa21.86■■□□□ 1.09
TDP1-216ENST00000556867 H0YGG7 62 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 H7BY64 318 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 HAT1O14929 419 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 DSCR3O14972 297 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 ACSL3O95573 720 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 RHOXF2BP0C7M4 288 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 CCDC166P0CW27 439 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 ARF3P61204 181 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms