RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PANX3Q96QZ0 392 aa14.07□□□□□ -0.16
CHD8-211ENST00000556833 BAG1Q99933 345 aaPredicted RBP14.07□□□□□ -0.16
CHD8-211ENST00000556833 ZFYVE21Q9BQ24 234 aa14.07□□□□□ -0.16
CHD8-211ENST00000556833 IL1RAPL1Q9NZN1 696 aa14.07□□□□□ -0.16
CHD8-211ENST00000556833 COPG2Q9UBF2 871 aa14.07□□□□□ -0.16
CHD8-211ENST00000556833 RUVBL1Q9Y265 456 aaKnown RBP14.07□□□□□ -0.16
CHD8-211ENST00000556833 TRGV8A0A0C4DH27 118 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 ARHGEF33A8MVX0 844 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 TARM1B6A8C7 271 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 HNRNPRO43390 633 aaKnown RBP14.06□□□□□ -0.16
CHD8-211ENST00000556833 SRPX2O60687 465 aaPredicted RBP14.06□□□□□ -0.16
CHD8-211ENST00000556833 VAPBO95292 243 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 HEXBP07686 556 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 ITGAMP11215 1152 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 MGAT1P26572 445 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 CMPK1P30085 196 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 RPA3P35244 121 aaPredicted RBP14.06□□□□□ -0.16
CHD8-211ENST00000556833 RPL22P35268 128 aaKnown RBP14.06□□□□□ -0.16
CHD8-211ENST00000556833 SNRPNP63162 240 aaKnown RBP14.06□□□□□ -0.16
CHD8-211ENST00000556833 MAT1AQ00266 395 aaKnown RBP14.06□□□□□ -0.16
CHD8-211ENST00000556833 MUM1Q2TAK8 710 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 PCID2Q5JVF3 399 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 FBXO42Q6P3S6 717 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 ADCK2Q7Z695 626 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 PLD3Q8IV08 490 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 MCEMP1Q8IX19 187 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 CSNK1A1LQ8N752 337 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 PSMF1Q92530 271 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 VPS50Q96JG6 964 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 MRPS30Q9NP92 439 aaKnown RBP14.06□□□□□ -0.16
CHD8-211ENST00000556833 SYBUQ9NX95 663 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 TAC3Q9UHF0 121 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 RIMKLBQ9ULI2 386 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 CRYL1Q9Y2S2 319 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 FBN2P35556 2912 aa14.06□□□□□ -0.16
CHD8-211ENST00000556833 PKDREJQ9NTG1 2253 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 A0A0A6YYC8 382 aaPredicted RBP14.05□□□□□ -0.16
CHD8-211ENST00000556833 IGHV3-20A0A0C4DH32 117 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 OR2A25A4D2G3 310 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 I3L1I5 382 aaPredicted RBP14.05□□□□□ -0.16
CHD8-211ENST00000556833 P2RX6O15547 441 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 WFS1O76024 890 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 WISP2O76076 250 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 USP1O94782 785 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 UNC5CO95185 931 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 WDPCPO95876 746 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 STSP08842 583 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 CXCR2P25025 360 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 MST1P26927 711 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 STIP1P31948 543 aaKnown RBP14.05□□□□□ -0.16
CHD8-211ENST00000556833 SOX11P35716 441 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 TNFSF10P50591 281 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 TDGF1P3P51864 188 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 EFNA3P52797 238 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 ACSBG2Q5FVE4 666 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 MFSD4BQ5TF39 518 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 ATG9BQ674R7 924 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 FCRLBQ6BAA4 426 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 PRMT9Q6P2P2 845 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 NDUFAF7Q7L592 441 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 SLC13A5Q86YT5 568 aaPredicted RBP14.05□□□□□ -0.16
CHD8-211ENST00000556833 TMEM139Q8IV31 216 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 AMER3Q8N944 861 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 COG1Q8WTW3 980 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 NR4A3Q92570 626 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 MFSD3Q96ES6 412 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 PHF12Q96QT6 1004 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 LMF1Q96S06 567 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 TRIM56Q9BRZ2 755 aaKnown RBP14.05□□□□□ -0.16
CHD8-211ENST00000556833 TREX1Q9NSU2 369 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 PAK5Q9P286 719 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 PCYOX1Q9UHG3 505 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 ENTPD4Q9Y227 616 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 MRPS2Q9Y399 296 aaKnown RBP14.05□□□□□ -0.16
CHD8-211ENST00000556833 OTOGQ6ZRI0 2925 aa14.05□□□□□ -0.16
CHD8-211ENST00000556833 IGHV1-45A0A0A0MS14 117 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 IGKV1-8A0A0C4DH67 115 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 A0A1B0GUH1 482 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 SYF2O95926 243 aaKnown RBP14.04□□□□□ -0.16
CHD8-211ENST00000556833 ANXA5P08758 320 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 CHRM3P20309 590 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 ARNTP27540 789 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 CCNFP41002 786 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 CUL1Q13616 776 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 PRTGQ2VWP7 1150 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 HIBCHQ6NVY1 386 aaPredicted RBP14.04□□□□□ -0.16
CHD8-211ENST00000556833 LRRC8BQ6P9F7 803 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 NEK10Q6ZWH5 1172 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 SPC24Q8NBT2 197 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 OR9A1PQ8NGU1 263 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 BIRC8Q96P09 236 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 RBSNQ9H1K0 784 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 SPATA7Q9P0W8 599 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 MKL2Q9ULH7 1088 aa14.04□□□□□ -0.16
CHD8-211ENST00000556833 TRAV17A0A0B4J275 112 aa14.03□□□□□ -0.16
CHD8-211ENST00000556833 OR2W5A6NFC9 320 aa14.03□□□□□ -0.16
CHD8-211ENST00000556833 A8MUI8 341 aa14.03□□□□□ -0.16
CHD8-211ENST00000556833 CCL21O00585 134 aa14.03□□□□□ -0.16
CHD8-211ENST00000556833 PCDH17O14917 1159 aa14.03□□□□□ -0.16
CHD8-211ENST00000556833 HAT1O14929 419 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms