RNA–Protein interactions for RNA: ENST00000556577.1

STRN3-208, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-208ENST00000556577 DDX39BQ13838 428 aaKnown RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 CYLC2Q14093 348 aaPredicted RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 SLBPQ14493 270 aaKnown RBP eCLIP7.55□□□□□ -1.2
STRN3-208ENST00000556577 PLCL1Q15111 1095 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 TEAD4Q15561 434 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 SMU1Q2TAY7 513 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 AGKQ53H12 422 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 ZNF542PQ5EBM4 170 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 C10orf62Q5T681 223 aaPredicted RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 ATG9BQ674R7 924 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 MED27Q6P2C8 311 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 NXPE4Q6UWF7 544 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 SLCO4C1Q6ZQN7 724 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 WDR5BQ86VZ2 330 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 SNX32Q86XE0 403 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 NRROSQ86YC3 692 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 LRRC56Q8IYG6 542 aaPredicted RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 KRT78Q8N1N4 520 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 MIER2Q8N344 545 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 SFRP1Q8N474 314 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 C2orf73Q8N5S3 287 aaPredicted RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 POU5F2Q8N7G0 328 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 OR52E1Q8NGJ3 308 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 OR2L8Q8NGY9 312 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 OR2T11Q8NH01 316 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 CCL4L1Q8NHW4 92 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 RP9Q8TA86 221 aaKnown RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 LCN9Q8WX39 176 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 USP7Q93009 1102 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 NEIL2Q969S2 332 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 MTFMTQ96DP5 389 aaKnown RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 RAB3IPQ96QF0 476 aaPredicted RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 HBEGFQ99075 208 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 C1orf50Q9BV19 199 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 ACAT2Q9BWD1 397 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 DUSP15Q9H1R2 295 aaPredicted RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 LRMDAQ9H2I8 198 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 TCEAL2Q9H3H9 227 aaPredicted RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 EHD1Q9H4M9 534 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 ZNF385DQ9H6B1 395 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 XKR8Q9H6D3 395 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 KIR3DX1Q9H7L2 352 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 PELI2Q9HAT8 420 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 LRTM1Q9HBL6 345 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 NOP53Q9NZM5 478 aaKnown RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 SCHIP1Q9P0W5 487 aaPredicted RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 TAAR2Q9P1P5 351 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 TAC3Q9UHF0 121 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 PNMA8BQ9ULN7 279 aaPredicted RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 DOLKQ9UPQ8 538 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 EIF3LQ9Y262 564 aaKnown RBP7.55□□□□□ -1.2
STRN3-208ENST00000556577 PCDHGA11Q9Y5H2 935 aa7.55□□□□□ -1.2
STRN3-208ENST00000556577 TTC28Q96AY4 2481 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 CABIN1Q9Y6J0 2220 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 TRBV23OR9-2A0A075B6M9 112 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 KIR2DS5A0A0G2JLQ3 304 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 A0A0G2JNG1 304 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 PIPSLA2A3N6 862 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 A6NCN8 305 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 TMEM221A6NGB7 291 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 B2RBV5 119 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 H0YIV9 168 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 KIR2DS3K7RE56 304 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 M0R296 226 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 LSM1O15116 133 aaKnown RBP7.54□□□□□ -1.2
STRN3-208ENST00000556577 BCAT2O15382 392 aaPredicted RBP7.54□□□□□ -1.2
STRN3-208ENST00000556577 GYG2O15488 501 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 PRAMEF4O60810 478 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 SEC22BO75396 215 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 RSL1D1O76021 490 aaKnown RBP7.54□□□□□ -1.2
STRN3-208ENST00000556577 VIPP01282 170 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 CSF2P04141 144 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 WNT1P04628 370 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 ALDOCP09972 364 aaKnown RBP7.54□□□□□ -1.2
STRN3-208ENST00000556577 PRR35P0CG20 571 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 T-ENOLP0DO92 83 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 HSD3B1P14060 373 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 NME1P15531 152 aaKnown RBP7.54□□□□□ -1.2
STRN3-208ENST00000556577 CD22P20273 847 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 CXCR2P25025 360 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 HSD3B2P26439 372 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 VARSP26640 1264 aaKnown RBP7.54□□□□□ -1.2
STRN3-208ENST00000556577 MAPK1P28482 360 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 DHPSP49366 369 aaPredicted RBP7.54□□□□□ -1.2
STRN3-208ENST00000556577 CCR8P51685 355 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 AFF3P51826 1226 aaKnown RBP7.54□□□□□ -1.2
STRN3-208ENST00000556577 RPL38P63173 70 aaKnown RBP7.54□□□□□ -1.2
STRN3-208ENST00000556577 HMGCS1Q01581 520 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 EMX2Q04743 252 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 CSTF1Q05048 431 aaKnown RBP7.54□□□□□ -1.2
STRN3-208ENST00000556577 CUL3Q13618 768 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 KIR2DS5Q14953 304 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 ELOCQ15369 112 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 AP5B1Q2VPB7 878 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 DNAL1Q4LDG9 190 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 PRRT3Q5FWE3 981 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 C6orf136Q5SQH8 315 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 CATSPEREQ5SY80 951 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 CACHD1Q5VU97 1274 aa7.54□□□□□ -1.2
STRN3-208ENST00000556577 PRAMEF9Q5VWM5 478 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms