RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 TJP3O95049 919 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 NADKO95544 446 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-220ENST00000556486 STSP08842 583 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 CPEP16870 476 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 AGXTP21549 392 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 CTNNA2P26232 953 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 ACADLP28330 430 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 MC4RP32245 332 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 SHMT2P34897 504 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 NSG1P42857 185 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 PLOD1Q02809 727 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-220ENST00000556486 CACNG1Q06432 222 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 ITIH4Q14624 930 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 SSPNQ14714 243 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 SPA17Q15506 151 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 TESK1Q15569 626 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 CYP2A13Q16696 494 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 PARP6Q2NL67 630 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 KRTAP21-3Q3LHN1 58 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 ZNF449Q6P9G9 518 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 C20orf204Q6ZNR8 217 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 LINC00696Q6ZRV3 163 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 PPP1R32Q7Z5V6 425 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 MRGPRGQ86SM5 289 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 SERPINA9Q86WD7 417 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 PIANPQ8IYJ0 282 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 TBC1D21Q8IYX1 336 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 GPR135Q8IZ08 494 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 CLDN19Q8N6F1 224 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 LRRN4CLQ8ND94 238 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 CATSPER1Q8NEC5 780 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 CCDC110Q8TBZ0 833 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 CCDC120Q96HB5 630 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 CDKN2AIPNLQ96HQ2 116 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 DNAJC1Q96KC8 554 aaKnown RBP9.61□□□□□ -0.87
SCFD1-220ENST00000556486 FER1L6-AS2Q96M78 137 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 FAM60AQ9NP50 221 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 OLAHQ9NV23 265 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 POLG2Q9UHN1 485 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 ICKQ9UPZ9 632 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 A0A1B0GUH1 482 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 FANCGO15287 622 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 PRICKLE3O43900 615 aaPredicted RBP9.6□□□□□ -0.87
SCFD1-220ENST00000556486 UBOX5O94941 541 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 ONECUT2O95948 504 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 UMODP07911 640 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 MAP2K3P46734 347 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 RWDD2BP57060 319 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 SUMO1P63165 101 aaKnown RBP9.6□□□□□ -0.87
SCFD1-220ENST00000556486 KLF1Q13351 362 aaPredicted RBP9.6□□□□□ -0.87
SCFD1-220ENST00000556486 ART3Q13508 389 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 ZNF169Q14929 603 aaPredicted RBP9.6□□□□□ -0.87
SCFD1-220ENST00000556486 ZIC1Q15915 447 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 ZBTB37Q5TC79 503 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 DARS2Q6PI48 645 aaKnown RBP9.6□□□□□ -0.87
SCFD1-220ENST00000556486 FAM180AQ6UWF9 173 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 SHISA6Q6ZSJ9 500 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 CDH24Q86UP0 819 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 TRIM73Q86UV7 250 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 TMTC1Q8IUR5 882 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 MMP21Q8N119 569 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 LRRC57Q8N9N7 239 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 OR2Y1Q8NGV0 311 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 OR5K2Q8NHB8 316 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 STYXQ8WUJ0 223 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 ALG3Q92685 438 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 PPP1R14AQ96A00 147 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 OR2A14Q96R47 310 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 SLX1AQ9BQ83 275 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 MESP1Q9BRJ9 268 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 HGH1Q9BTY7 390 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 AP1M1Q9BXS5 423 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 SPRTNQ9H040 489 aaPredicted RBP9.6□□□□□ -0.87
SCFD1-220ENST00000556486 FAM96AQ9H5X1 160 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 LRRC40Q9H9A6 602 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 SLC6A20Q9NP91 592 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 DHCR7Q9UBM7 475 aaKnown RBP9.6□□□□□ -0.87
SCFD1-220ENST00000556486 GDF2Q9UK05 429 aaPredicted RBP9.6□□□□□ -0.87
SCFD1-220ENST00000556486 FBXL4Q9UKA2 621 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 RIMKLBQ9ULI2 386 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 TFR2Q9UP52 801 aa9.6□□□□□ -0.87
SCFD1-220ENST00000556486 ANKRD12Q6UB98 2062 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 A0A0J9YY10 115 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 LOC100289279A0A1B0GTE1 492 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 SLC5A10A0PJK1 596 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 CCL21O00585 134 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 CCL22O00626 93 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 ZSCAN9O15535 394 aaPredicted RBP9.59□□□□□ -0.87
SCFD1-220ENST00000556486 OR2B3O76000 313 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 IPO13O94829 963 aaKnown RBP9.59□□□□□ -0.87
SCFD1-220ENST00000556486 AP2A1O95782 977 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 F10P00742 488 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 FTH1P02794 183 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 CHRM5P08912 532 aaPredicted RBP9.59□□□□□ -0.87
SCFD1-220ENST00000556486 TPBGLP0DKB5 382 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 UGT2B7P16662 529 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 PTGER4P35408 488 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 CYLC1P35663 651 aaPredicted RBP9.59□□□□□ -0.87
SCFD1-220ENST00000556486 CETN2P41208 172 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 TSFMP43897 325 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms