RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 PGM2Q96G03 612 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 CFAP36Q96G28 342 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SMARCD1Q96GM5 515 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ZDHHC12Q96GR4 267 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 DGAT2Q96PD7 388 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 GAD1Q99259 594 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 PKP4Q99569 1192 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ACBD6Q9BR61 282 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 MECRQ9BV79 373 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SPATA5L1Q9BVQ7 753 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 HERC2P3Q9BVR0 1158 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 CALN1Q9BXU9 219 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ACTRT3Q9BYD9 372 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 TPSD1Q9BZJ3 242 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 PLEKHA4Q9H4M7 779 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SLC32A1Q9H598 525 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 TMBIM4Q9HC24 238 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 CNGB3Q9NQW8 809 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 RGS18Q9NS28 235 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SLC35D1Q9NTN3 355 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 ABCB8Q9NUT2 735 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 OSGIN1Q9UJX0 560 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 PADI1Q9ULC6 663 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SHOC2Q9UQ13 582 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 RPH3AQ9Y2J0 694 aaPredicted RBP5.05□□□□□ -1.6
SRP54-211ENST00000556445 TMED5Q9Y3A6 229 aa5.05□□□□□ -1.6
SRP54-211ENST00000556445 SF3B1O75533 1304 aaKnown RBP eCLIP5.04□□□□□ -1.6
SRP54-211ENST00000556445 OR2A25A4D2G3 310 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 SH2D7A6NKC9 451 aaPredicted RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 C3orf70A6NLC5 250 aaPredicted RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 HACD1B0YJ81 288 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 GPR89AB7ZAQ6 455 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 H0YGN5 161 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 M0QX08 132 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 M0QZQ0 153 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 MYO1CO00159 1063 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 RASGRF2O14827 1237 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 DCLK1O15075 740 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 RGS16O15492 202 aaPredicted RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 PAPSS1O43252 624 aaPredicted RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 RBMXL2O75526 392 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 SPAG6O75602 509 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 B3GAT3O94766 335 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 DDHD2O94830 711 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 TTC4O95801 387 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 DDAH2O95865 285 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 ONECUT2O95948 504 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 FYNP06241 537 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 ABHD2P08910 425 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 GPR89BP0CG08 455 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 PRR35P0CG20 571 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 CCDC130P13994 396 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 CAPN2P17655 700 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 NR1D1P20393 614 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 LMO2P25791 158 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 IVDP26440 423 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 KLRC2P26717 231 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 PCSK6P29122 969 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 CD6P30203 668 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 CYP2C18P33260 490 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 HTR7P34969 479 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 PHBP35232 272 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 ARSEP51690 589 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 ZNF134P52741 427 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 CASP9P55211 416 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 PROK1P58294 105 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 EIF3EP60228 445 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 UFM1P61960 85 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 COG7P83436 770 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 OTUD4Q01804 1114 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 SMARCB1Q12824 385 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 ELAVL2Q12926 359 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 TRA2AQ13595 282 aaKnown RBP eCLIP5.04□□□□□ -1.6
SRP54-211ENST00000556445 PDK1Q15118 436 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 DPYSL2Q16555 572 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 UPP1Q16831 310 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 CCDC14Q49A88 953 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 MDH1BQ5I0G3 518 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 ZNF618Q5T7W0 954 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 MANEALQ5VSG8 457 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 CES4AQ5XG92 561 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 WSCD1Q658N2 575 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 ABLIM2Q6H8Q1 611 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 SCYL2Q6P3W7 929 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 ARHGAP11AQ6P4F7 1023 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 RHBDF2Q6PJF5 856 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 ISLR2Q6UXK2 745 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 KDM7AQ6ZMT4 941 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 RBPMS2Q6ZRY4 209 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 CENPUQ71F23 418 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 PARS2Q7L3T8 475 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 KBTBD6Q86V97 674 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 PIGZQ86VD9 579 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 CCDC25Q86WR0 208 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 CDKL3Q8IVW4 592 aaPredicted RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 DCP1BQ8IZD4 617 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 ZCCHC9Q8N567 271 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 TMEM116Q8NCL8 245 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 ACTL9Q8TC94 416 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 ATG4AQ8WYN0 398 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms