RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ZGLP1P0C6A0 271 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 PNLIPRP1P54315 467 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 KLC1Q07866 573 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 CTBP1Q13363 440 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 PRTGQ2VWP7 1150 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 HIST2H2BCQ6DN03 193 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 NEK10Q6ZWH5 1172 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 DENND6AQ8IWF6 608 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 REXO1L1PQ8IX06 675 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 RASGEF1CQ8N431 466 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 PBKQ96KB5 322 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 C10orf90Q96M02 699 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 WDR77Q9BQA1 342 aaPredicted RBP21.55■■□□□ 1.04
ACTN1-220ENST00000556433 LHPPQ9H008 270 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 CCDC68Q9H2F9 335 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 XAB2Q9HCS7 855 aaKnown RBP21.55■■□□□ 1.04
ACTN1-220ENST00000556433 FBXO6Q9NRD1 293 aaPredicted RBP21.55■■□□□ 1.04
ACTN1-220ENST00000556433 CDC14AQ9UNH5 594 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 PCDHGA10Q9Y5H3 936 aa21.55■■□□□ 1.04
ACTN1-220ENST00000556433 PRRC2CQ9Y520 2896 aaKnown RBP21.55■■□□□ 1.04
ACTN1-220ENST00000556433 CNTRLQ7Z7A1 2325 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 ZNF839A8K0R7 811 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 NRDCO43847 1150 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 RNF224P0DH78 156 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 FBLP22087 321 aaKnown RBP21.54■■□□□ 1.04
ACTN1-220ENST00000556433 COILP38432 576 aaPredicted RBP21.54■■□□□ 1.04
ACTN1-220ENST00000556433 PRDX1Q06830 199 aaKnown RBP21.54■■□□□ 1.04
ACTN1-220ENST00000556433 VWA2Q5GFL6 755 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 ICE2Q659A1 982 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 PAQR7Q86WK9 346 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 SPNS2Q8IVW8 549 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 PPFIBP2Q8ND30 876 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 DNAJB14Q8TBM8 379 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 THOC3Q96J01 351 aaKnown RBP21.54■■□□□ 1.04
ACTN1-220ENST00000556433 SERPINB12Q96P63 405 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 MESP1Q9BRJ9 268 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 YIPF2Q9BWQ6 316 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 ABCF3Q9NUQ8 709 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 UTP6Q9NYH9 597 aaKnown RBP21.54■■□□□ 1.04
ACTN1-220ENST00000556433 KLHL42Q9P2K6 505 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 TAC3Q9UHF0 121 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 C3orf18Q9UK00 162 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 CSAG2Q9Y5P2 127 aa21.54■■□□□ 1.04
ACTN1-220ENST00000556433 PCM1Q15154 2024 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 MDC1Q14676 2089 aaKnown RBP21.53■■□□□ 1.04
ACTN1-220ENST00000556433 IGKV1-8A0A0C4DH67 115 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 ZCWPW2A0A1B0GU75 182 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 PHF2O75151 1096 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 CCNDBP1O95273 360 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 DDAH2O95865 285 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 SYF2O95926 243 aaKnown RBP21.53■■□□□ 1.04
ACTN1-220ENST00000556433 EMP3P54852 163 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 Q0VFX4 171 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 CUL1Q13616 776 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 ZNF549Q6P9A3 640 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 CCDC137Q6PK04 289 aaKnown RBP21.53■■□□□ 1.04
ACTN1-220ENST00000556433 IGFL2Q6UWQ7 119 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 CSNK1A1LQ8N752 337 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 GIMAP7Q8NHV1 300 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 PPP4R1Q8TF05 950 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 ZNF480Q8WV37 535 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 NTNG1Q9Y2I2 539 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 JRKLQ9Y4A0 524 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 MAD1L1Q9Y6D9 718 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 DOCK10Q96BY6 2186 aa21.53■■□□□ 1.04
ACTN1-220ENST00000556433 ANKUB1A6NFN9 424 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 MAP2K7O14733 419 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 KIF5CO60282 957 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 SLC16A8O95907 504 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 MPC1LP0DKB6 136 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 ACPPP15309 386 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 ELOAQ14241 798 aaKnown RBP21.52■■□□□ 1.04
ACTN1-220ENST00000556433 ZNF425Q6IV72 752 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 CYHR1Q6ZMK1 362 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 LAPTM4BQ86VI4 370 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 FBXO15Q8NCQ5 510 aaPredicted RBP21.52■■□□□ 1.04
ACTN1-220ENST00000556433 ASB11Q8WXH4 323 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 KCNJ9Q92806 393 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 C8orf44Q96CB5 159 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 EPS8L2Q9H6S3 715 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 SYNPO2LQ9H987 977 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 ZNF160Q9HCG1 818 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 AGPAT4Q9NRZ5 378 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 C20orf96Q9NUD7 363 aaPredicted RBP21.52■■□□□ 1.04
ACTN1-220ENST00000556433 TRPC4Q9UBN4 977 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 NOVA2Q9UNW9 492 aaKnown RBP21.52■■□□□ 1.04
ACTN1-220ENST00000556433 RUVBL1Q9Y265 456 aaKnown RBP21.52■■□□□ 1.04
ACTN1-220ENST00000556433 MED16Q9Y2X0 877 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 DHRS7Q9Y394 339 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 NEU2Q9Y3R4 380 aa21.52■■□□□ 1.04
ACTN1-220ENST00000556433 HIVEP3Q5T1R4 2406 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 IGLV3-12A0A075B6K2 115 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 E7ENX8 843 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 SMAPO00193 183 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 PRPF4O43172 522 aaKnown RBP eCLIP21.51■■□□□ 1.039e-7■■■□□ 15.8
ACTN1-220ENST00000556433 ZBTB14O43829 449 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 HPP00738 406 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 ENO3P13929 434 aaPredicted RBP21.51■■□□□ 1.03
ACTN1-220ENST00000556433 SLC1A2P43004 574 aa21.51■■□□□ 1.03
ACTN1-220ENST00000556433 EMP2P54851 167 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms