RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 ALDH9A1P49189 494 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 CLDN8P56748 225 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 PCDH1Q08174 1060 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 FAPQ12884 760 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 ABRQ12979 859 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 TNK1Q13470 666 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 SUSD1Q6UWL2 747 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 GDPGP1Q6ZNW5 385 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 FAM20CQ8IXL6 584 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 SLC38A6Q8IZM9 456 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 EFHBQ8N7U6 833 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 OR5H6Q8NGV6 325 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 OR10T2Q8NGX3 314 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 ASB15Q8WXK1 588 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 HSH2DQ96JZ2 352 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 FRMD6Q96NE9 622 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 COQ7Q99807 217 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 TTPALQ9BTX7 342 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 TTLL2Q9BWV7 592 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 SRRQ9GZT4 340 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 C12orf10Q9HB07 376 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 PRDM8Q9NQV8 689 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 DNMT3LQ9UJW3 386 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 PCDHGB3Q9Y5G1 929 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 SNX8Q9Y5X2 465 aa7.56□□□□□ -1.2
CHD8-209ENST00000555935 MCM3APO60318 1980 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 TEX51A0A1B0GUA7 166 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 A0A1W2PQ09 198 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 A0A1W2PQ72 361 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 NT5C1B-RDH14C9J2C7 533 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 E5RI56 91 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 SEC14L5O43304 696 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 NIPSNAP2O75323 286 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 ULK1O75385 1050 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 DIRAS1O95057 198 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 VIPP01282 170 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 ESR1P03372 595 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 BCKDHAP12694 445 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 MYL9P24844 172 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 PTX3P26022 381 aaPredicted RBP7.55□□□□□ -1.2
CHD8-209ENST00000555935 RPS14P62263 151 aaKnown RBP7.55□□□□□ -1.2
CHD8-209ENST00000555935 ST3GAL4Q11206 333 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 HYAL2Q12891 473 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 TAF1AQ15573 450 aaPredicted RBP7.55□□□□□ -1.2
CHD8-209ENST00000555935 VMACQ2NL98 169 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 TRIM60Q495X7 471 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 CDONQ4KMG0 1287 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 ESCO2Q56NI9 601 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 CTSL3PQ5NE16 218 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 PRAMEF18Q5VWM3 479 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 LRRC66Q68CR7 880 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 GPR153Q6NV75 609 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 TAPT1Q6NXT6 567 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 DOK6Q6PKX4 331 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 ATCAYQ86WG3 371 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 ZNF683Q8IZ20 524 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 CPA6Q8N4T0 437 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 FAM181AQ8N9Y4 354 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 TESCQ96BS2 214 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 FYTTD1Q96QD9 318 aaKnown RBP7.55□□□□□ -1.2
CHD8-209ENST00000555935 CITED4Q96RK1 184 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 ZNF717Q9BY31 904 aaPredicted RBP7.55□□□□□ -1.2
CHD8-209ENST00000555935 MROH8Q9H579 483 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 ZNF408Q9H9D4 720 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 GPR83Q9NYM4 423 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 CNOT2Q9NZN8 540 aaKnown RBP7.55□□□□□ -1.2
CHD8-209ENST00000555935 TRPS1Q9UHF7 1281 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 NUFIP1Q9UHK0 495 aaKnown RBP7.55□□□□□ -1.2
CHD8-209ENST00000555935 MUTYHQ9UIF7 546 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 ZMYM5Q9UJ78 669 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 ZNF490Q9ULM2 529 aaPredicted RBP7.55□□□□□ -1.2
CHD8-209ENST00000555935 SPEF1Q9Y4P9 236 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 PPP2R3BQ9Y5P8 575 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 CSADQ9Y600 493 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 SMIM35A0A1B0GVV1 85 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 OR6C70A6NIJ9 312 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 C2orf81A6NN90 581 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 C12orf71A8MTZ7 269 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 TEX28O15482 410 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 RGS5O15539 181 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 CPNE3O75131 537 aaKnown RBP7.55□□□□□ -1.2
CHD8-209ENST00000555935 GLUD1P00367 558 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 ITGB1P05556 798 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 HSMCR30P0CW71 290 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 PRPS2P11908 318 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 GZMKP49863 264 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 HMGCS1Q01581 520 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 RUNX1T1Q06455 604 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 ZNF235Q14590 738 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 ZNF79Q15937 498 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 OR4F3Q6IEY1 312 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 METTL2BQ6P1Q9 378 aaKnown RBP7.55□□□□□ -1.2
CHD8-209ENST00000555935 FAM171BQ6P995 826 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 LYPD8Q6UX82 237 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 CREB3L2Q70SY1 520 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 TRIM69Q86WT6 500 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 LSMEM1Q8N8F7 131 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 SNAPC3Q92966 411 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 KCNC2Q96PR1 638 aa7.55□□□□□ -1.2
CHD8-209ENST00000555935 TRIB3Q96RU7 358 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms