RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 WDR87Q6ZQQ6 2873 aa12.05□□□□□ -0.48
ABCD4-223ENST00000555904 DNAH14Q0VDD8 3507 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 IGHV5-10-1A0A0J9YXX1 117 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 LRRC14BA6NHZ5 514 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 A8MU76 341 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 E7EQ34 232 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 NPHS1O60500 1241 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 UGDHO60701 494 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 CRCPO75575 148 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 SNUPNO95149 360 aaKnown RBP12.04□□□□□ -0.48
ABCD4-223ENST00000555904 KCNK5O95279 499 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 CLDN9O95484 217 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 ANKRD34CP0C6C1 535 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 THRAP10827 490 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
ABCD4-223ENST00000555904 EZRP15311 586 aaKnown RBP12.04□□□□□ -0.48
ABCD4-223ENST00000555904 INHBCP55103 352 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 WDR4P57081 412 aaKnown RBP12.04□□□□□ -0.48
ABCD4-223ENST00000555904 HSD11B2P80365 405 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 LAPTM5Q13571 262 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 HIST2H2ACQ16777 129 aaPredicted RBP12.04□□□□□ -0.48
ABCD4-223ENST00000555904 KIAA1614Q5VZ46 1190 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 HIST2H2AA3Q6FI13 130 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 CYB5D1Q6P9G0 228 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 DHRS13Q6UX07 377 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 ZCCHC23Q6ZST2 131 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 FRMD7Q6ZUT3 714 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 KRT78Q8N1N4 520 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 C19orf47Q8N9M1 422 aaKnown RBP12.04□□□□□ -0.48
ABCD4-223ENST00000555904 FLVCR1-AS1Q8TAF5 88 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 TRPC4APQ8TEL6 797 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 N4BP2L2Q92802 583 aaPredicted RBP12.04□□□□□ -0.48
ABCD4-223ENST00000555904 ZUFSPQ96AP4 578 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 PTCD3Q96EY7 689 aaKnown RBP12.04□□□□□ -0.48
ABCD4-223ENST00000555904 CCDC74BQ96LY2 380 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 AIF1LQ9BQI0 150 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 EFCAB11Q9BUY7 163 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 TWSG1Q9GZX9 223 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 KLHL25Q9H0H3 589 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 EHD1Q9H4M9 534 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 PELI2Q9HAT8 420 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 PDE7BQ9NP56 450 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 SLC6A20Q9NP91 592 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 TMEM184CQ9NVA4 438 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 TOR4AQ9NXH8 423 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 TMEM9Q9P0T7 183 aa12.04□□□□□ -0.48
ABCD4-223ENST00000555904 ARHGEF17Q96PE2 2063 aaPredicted RBP12.03□□□□□ -0.48
ABCD4-223ENST00000555904 SLC9B1P1A6NJY1 282 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 TMEM114B3SHH9 223 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 H7BY64 318 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 HGSO14964 777 aaPredicted RBP12.03□□□□□ -0.48
ABCD4-223ENST00000555904 KIF1CO43896 1103 aaKnown RBP12.03□□□□□ -0.48
ABCD4-223ENST00000555904 HSPA4LO95757 839 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 C1GALT1C1LP0DN25 315 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 PVRP15151 417 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 ST6GAL1P15907 406 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 BGNP21810 368 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 CSTF2P33240 577 aaKnown RBP eCLIP12.03□□□□□ -0.48
ABCD4-223ENST00000555904 HNF4AP41235 474 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 GRIA3P42263 894 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 SEPHS1P49903 392 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 CDH13P55290 713 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 PKNOX1P55347 436 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 INSM1Q01101 510 aaPredicted RBP12.03□□□□□ -0.48
ABCD4-223ENST00000555904 CFHR1Q03591 330 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 CHIT1Q13231 466 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 STX3Q13277 289 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 RCN2Q14257 317 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 UNC50Q53HI1 259 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 ZC3H12BQ5HYM0 836 aaKnown RBP12.03□□□□□ -0.48
ABCD4-223ENST00000555904 HES3Q5TGS1 186 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 ATG9BQ674R7 924 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 FIGLAQ6QHK4 219 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 NXPE4Q6UWF7 544 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 GPRIN3Q6ZVF9 776 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 FAM20CQ8IXL6 584 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 KIRREL3Q8IZU9 778 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 ABHD11Q8NFV4 315 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 LRRC8CQ8TDW0 803 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 UBE2E3Q969T4 207 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 GRAMD1AQ96CP6 724 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 REPS1Q96D71 796 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 PRAP1Q96NZ9 151 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 NSUN5Q96P11 429 aaKnown RBP12.03□□□□□ -0.48
ABCD4-223ENST00000555904 TRAPPC9Q96Q05 1148 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 ZNF382Q96SR6 550 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 PLCD4Q9BRC7 762 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 GATA5Q9BWX5 397 aaPredicted RBP12.03□□□□□ -0.48
ABCD4-223ENST00000555904 GSTO2Q9H4Y5 243 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 ZNF768Q9H5H4 540 aaKnown RBP12.03□□□□□ -0.48
ABCD4-223ENST00000555904 FANCEQ9HB96 536 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 MID1IP1Q9NPA3 183 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 CUEDC1Q9NWM3 386 aaPredicted RBP12.03□□□□□ -0.48
ABCD4-223ENST00000555904 CLCA2Q9UQC9 943 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 KLK4Q9Y5K2 254 aa12.03□□□□□ -0.48
ABCD4-223ENST00000555904 ZNF292O60281 2723 aa12.02□□□□□ -0.48
ABCD4-223ENST00000555904 EP300Q09472 2414 aaPredicted RBP12.02□□□□□ -0.48
ABCD4-223ENST00000555904 IGHV5-51A0A0C4DH38 117 aa12.02□□□□□ -0.49
ABCD4-223ENST00000555904 EBLN1P0CF75 366 aa12.02□□□□□ -0.49
ABCD4-223ENST00000555904 FGF3P11487 239 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms