RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 C17orf64Q86WR6 236 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 KYQ8NBH2 561 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 GPR156Q8NFN8 814 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 OR2T11Q8NH01 316 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 MAELQ96JY0 434 aaKnown RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 HAUS8Q9BT25 410 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 GTPBP2Q9BX10 602 aaKnown RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 NUSAP1Q9BXS6 441 aaKnown RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 TCF7L2Q9NQB0 619 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 ZNF490Q9ULM2 529 aaPredicted RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 SLC6A14Q9UN76 642 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 APOBEC2Q9Y235 224 aaKnown RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 PCDHB11Q9Y5F2 797 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 TMEM131Q92545 1883 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 IGKV1-8A0A0C4DH67 115 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 FEZF1A0PJY2 475 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 PIPSLA2A3N6 862 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 GSAPA4D1B5 854 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 ARHGAP33O14559 1287 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 PDYNP01213 254 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 INHBCP55103 352 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 HMGCS1Q01581 520 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 PRDX1Q06830 199 aaKnown RBP9.83□□□□□ -0.84
SRP54-208ENST00000555557 IFT88Q13099 833 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 SLBPQ14493 270 aaKnown RBP eCLIP9.83□□□□□ -0.84
SRP54-208ENST00000555557 GGTA1PQ4G0N0 100 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 C14orf28Q4W4Y0 310 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 C6orf132Q5T0Z8 1188 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.83□□□□□ -0.84
SRP54-208ENST00000555557 KIAA1614Q5VZ46 1190 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 ATG9BQ674R7 924 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 GRHL2Q6ISB3 625 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 ZC3H14Q6PJT7 736 aaKnown RBP9.83□□□□□ -0.84
SRP54-208ENST00000555557 Q6ZSR9 355 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 TRIM73Q86UV7 250 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 C17orf82Q86X59 251 aaPredicted RBP9.83□□□□□ -0.84
SRP54-208ENST00000555557 SDR16C5Q8N3Y7 309 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 SAP25Q8TEE9 199 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 ZFPM2Q8WW38 1151 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 SELENOMQ8WWX9 145 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 CCT6BQ92526 530 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 TUBGCP3Q96CW5 907 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 PTCD3Q96EY7 689 aaKnown RBP9.83□□□□□ -0.84
SRP54-208ENST00000555557 MARK4Q96L34 752 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 PPM1MQ96MI6 270 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 ELOVL6Q9H5J4 265 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 AKTIPQ9H8T0 292 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 HRASLS2Q9NWW9 162 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 CSNK1G3Q9Y6M4 447 aa9.83□□□□□ -0.84
SRP54-208ENST00000555557 TRIM38O00635 465 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 UGDHO60701 494 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 PEX11AO75192 247 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 SH3BGRLO75368 114 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 EPN2O95208 641 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 PCNAP12004 261 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 NCF2P19878 526 aaPredicted RBP9.82□□□□□ -0.84
SRP54-208ENST00000555557 CASP2P42575 452 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 FASLGP48023 281 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 PPP1CAP62136 330 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 PCDH1Q08174 1060 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 DDX39BQ13838 428 aaKnown RBP9.82□□□□□ -0.84
SRP54-208ENST00000555557 TBCCQ15814 346 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 SPDYAQ5MJ70 313 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 FRG2Q64ET8 278 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 ACAD11Q709F0 780 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 KANSL1Q7Z3B3 1105 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 ADCK2Q7Z695 626 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 RABEPKQ7Z6M1 372 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 FAM129CQ86XR2 697 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 PLD3Q8IV08 490 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 SLC35F3Q8IY50 421 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 KIRREL3Q8IZU9 778 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 FITM2Q8N6M3 262 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 OR2L3Q8NG85 312 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 RSC1A1Q92681 617 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 USP7Q93009 1102 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 FRG2BQ96QU4 278 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 OR2A14Q96R47 310 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 MTERF1Q99551 399 aaKnown RBP9.82□□□□□ -0.84
SRP54-208ENST00000555557 SLC38A3Q99624 504 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 NMUR2Q9GZQ4 415 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 KLHL25Q9H0H3 589 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 PCBD2Q9H0N5 130 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 STN1Q9H668 368 aaKnown RBP9.82□□□□□ -0.84
SRP54-208ENST00000555557 PRM3Q9NNZ6 103 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 MRPS30Q9NP92 439 aaKnown RBP9.82□□□□□ -0.84
SRP54-208ENST00000555557 ACTR10Q9NZ32 417 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 ARMCX1Q9P291 453 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 SNX6Q9UNH7 406 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 RNF215Q9Y6U7 377 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 CACNA1HO95180 2353 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 H0YIV9 168 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 CASC3O15234 703 aaKnown RBP9.82□□□□□ -0.84
SRP54-208ENST00000555557 KRT6AP02538 564 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 KRT6BP04259 564 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 HOXB3P14651 431 aaPredicted RBP9.82□□□□□ -0.84
SRP54-208ENST00000555557 UGT2B7P16662 529 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 ENGP17813 658 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 ALDH4A1P30038 563 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 PLA2G5P39877 138 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms