RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	ACAT2	Q9BWD1	397 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	CDK19	Q9BWU1	502 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	ACTL8	Q9H568	366 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	TFB2M	Q9H5Q4	396 aa	Known RBP	4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	TLE6	Q9H808	572 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	UPF2	Q9HAU5	1272 aa	Known RBP	4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	ECHDC1	Q9NTX5	307 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	STUB1	Q9UNE7	303 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	GPR132	Q9UNW8	380 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	PA2G4	Q9UQ80	394 aa	Known RBP	4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	PCDHGB1	Q9Y5G3	927 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	PCDHGA1	Q9Y5H4	931 aa		4.01	□□□□□ -1.77
KTN1-222	ENST00000555506	DENND3	A2RUS2	1198 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	SMIM30	A4D0T7	59 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	C2orf81	A6NN90	581 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506		F8VVB4	439 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506		F8VWA3	439 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506		O00370	1275 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	SLC22A3	O75751	556 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	MT-ND3	P03897	115 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	THEGL	P0DJG4	465 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	IGHV4-31	P0DP07	118 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	STMN1	P16949	149 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	EFNA1	P20827	205 aa	Predicted RBP	4	□□□□□ -1.77
KTN1-222	ENST00000555506	NKX2-1	P43699	371 aa	Predicted RBP	4	□□□□□ -1.77
KTN1-222	ENST00000555506	IER3	P46695	156 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	MAZ	P56270	477 aa	Known RBP	4	□□□□□ -1.77
KTN1-222	ENST00000555506	LASP1	Q14847	261 aa	Known RBP	4	□□□□□ -1.77
KTN1-222	ENST00000555506	TAF13	Q15543	124 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	CCNYL2	Q5T2Q4	361 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	LYSMD4	Q5XG99	296 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	ZNF324B	Q6AW86	544 aa	Predicted RBP	4	□□□□□ -1.77
KTN1-222	ENST00000555506	PRSS55	Q6UWB4	352 aa	Predicted RBP	4	□□□□□ -1.77
KTN1-222	ENST00000555506	MEX3D	Q86XN8	651 aa	Known RBP	4	□□□□□ -1.77
KTN1-222	ENST00000555506	EID3	Q8N140	333 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	POC1A	Q8NBT0	407 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	LMO3	Q8TAP4	145 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	CD101	Q93033	1021 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	MAP3K3	Q99759	626 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	PSD2	Q9BQI7	771 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	TRPC4	Q9UBN4	977 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	ACAD8	Q9UKU7	415 aa		4	□□□□□ -1.77
KTN1-222	ENST00000555506	ILVBL	A1L0T0	632 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	PRSS46	E5RG02	174 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	TTI1	O43156	1089 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	NME6	O75414	186 aa	Predicted RBP	3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	CRCP	O75575	148 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	MOCS2	O96007	188 aa	Predicted RBP	3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	IGHV4-38-2	P0DP08	117 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	CSTF2	P33240	577 aa	Known RBP eCLIP	3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	ADAR	P55265	1226 aa	Known RBP	3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	NME5	P56597	212 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	KIAA1024L	P59773	190 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	KLHL22	Q53GT1	634 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	SLC35D3	Q5M8T2	416 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	FAM46C	Q5VWP2	391 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	KIAA1161	Q6NSJ0	714 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	ALKBH5	Q6P6C2	394 aa	Known RBP	3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	SPSB3	Q6PJ21	355 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	CCDC83	Q8IWF9	413 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	MAB21L3	Q8N8X9	362 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	SLC24A4	Q8NFF2	622 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	DMBX1	Q8NFW5	382 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	BCL2L2	Q92843	193 aa	Predicted RBP	3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	ATP6V0A1	Q93050	837 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	TSACC	Q96A04	125 aa	Predicted RBP	3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	CCDC3	Q9BQI4	270 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	RHNO1	Q9BSD3	238 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	KRTAP2-2	Q9BYT5	123 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	MTMR12	Q9C0I1	747 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	SDCBP2	Q9H190	292 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	FAM207A	Q9NSI2	230 aa	Predicted RBP	3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	STX8	Q9UNK0	236 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	HBS1L	Q9Y450	684 aa	Known RBP	3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	RIPK3	Q9Y572	518 aa		3.99	□□□□□ -1.77
KTN1-222	ENST00000555506	IGLV9-49	A0A0B4J1Y8	123 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	C13orf42	A0A1B0GVH6	325 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	BICDL2	A1A5D9	508 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	TMEM150C	B9EJG8	249 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	ACOT8	O14734	319 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	RAD51D	O75771	328 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	OLFM2	O95897	454 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	APOH	P02749	345 aa	Predicted RBP	3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	HMOX1	P09601	288 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	FGF3	P11487	239 aa	Predicted RBP	3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	GP1BB	P13224	206 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	LIF	P15018	202 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	VCL	P18206	1134 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	CA6	P23280	308 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	PIK3R1	P27986	724 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	CTNNB1	P35222	781 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	GLIPR1	P48060	266 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	GAS1	P54826	345 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	ARF5	P84085	180 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	IL10RB	Q08334	325 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	TRAP1	Q12931	704 aa	Known RBP	3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	NPRL3	Q12980	569 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	HERC3	Q15034	1050 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	RPS6KA1	Q15418	735 aa		3.98	□□□□□ -1.77
KTN1-222	ENST00000555506	GPR141	Q7Z602	305 aa		3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms