RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 GABRA4P48169 554 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 NAE1Q13564 534 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 PTCHD3Q3KNS1 767 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 C1orf189Q5VU69 101 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 RHBDD2Q6NTF9 364 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 RNF44Q7L0R7 432 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 TAOK1Q7L7X3 1001 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 C17orf64Q86WR6 236 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 CEP97Q8IW35 865 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 SLC38A9Q8NBW4 561 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 ANKRD7Q92527 254 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 MRRFQ96E11 262 aaKnown RBP11.6□□□□□ -0.55
SRP54-206ENST00000555317 RHOXF2Q9BQY4 288 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 PLCD4Q9BRC7 762 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 HAUS8Q9BT25 410 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 NLNQ9BYT8 704 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 FAM117AQ9C073 453 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 ATG10Q9H0Y0 220 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 SLC6A20Q9NP91 592 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 PCDHGA6Q9Y5G7 932 aa11.6□□□□□ -0.55
SRP54-206ENST00000555317 A0A1B0GX78 115 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 CDC14CA4D256 554 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 OR2A25A4D2G3 310 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 ATXN7O15265 892 aaPredicted RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 PHGDHO43175 533 aaKnown RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 HCRTR1O43613 425 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 CTSVO60911 334 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 CREG1O75629 220 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 S100BP04271 92 aaPredicted RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 ANXA5P08758 320 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 CD63P08962 238 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 RAB40ALP0C0E4 278 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 CCDC166P0CW27 439 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 PIM1P11309 404 aaPredicted RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 F8A1P23610 371 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 CRABP2P29373 138 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 RAB10P61026 200 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 ATP6V0D1P61421 351 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 DCDP81605 110 aaKnown RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 ERV3-1Q14264 604 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 EFTUD2Q15029 972 aaKnown RBP eCLIP11.59□□□□□ -0.557e-8■□□□□ 11.2
SRP54-206ENST00000555317 FAM214AQ32MH5 1076 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 CRTC2Q53ET0 693 aaPredicted RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 WASHC2DQ5SRD0 308 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 BORAQ6PGQ7 559 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 TTLL10Q6ZVT0 673 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 TBC1D1Q86TI0 1168 aaPredicted RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 SYVN1Q86TM6 617 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 PAQR7Q86WK9 346 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 RELL1Q8IUW5 271 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 TBC1D19Q8N5T2 526 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 ENDOVQ8N8Q3 282 aaKnown RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 LSM14AQ8ND56 463 aaKnown RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 EXTL1Q92935 676 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 FBXL8Q96CD0 374 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 CABS1Q96KC9 395 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 MCMBPQ9BTE3 642 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 DERL2Q9GZP9 239 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 CDC42EP4Q9H3Q1 356 aaKnown RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 STARD5Q9NSY2 213 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 CUTCQ9NTM9 273 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 NINJ2Q9NZG7 142 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 IFT80Q9P2H3 777 aaPredicted RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 DHCR7Q9UBM7 475 aaKnown RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 NFU1Q9UMS0 254 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 FARSAQ9Y285 508 aaKnown RBP11.59□□□□□ -0.55
SRP54-206ENST00000555317 FER1L5A0AVI2 2057 aa11.59□□□□□ -0.55
SRP54-206ENST00000555317 H7BY64 318 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 CDC7O00311 574 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 TXNDC9O14530 226 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 HAT1O14929 419 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 DSCR3O14972 297 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 FAM155BO75949 473 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 CTSBP07858 339 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 INHBAP08476 426 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 CCR10P46092 362 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 HNMTP50135 292 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 RPS18P62269 152 aaKnown RBP11.58□□□□□ -0.56
SRP54-206ENST00000555317 YBX1P67809 324 aaKnown RBP11.58□□□□□ -0.56
SRP54-206ENST00000555317 NCF4Q15080 339 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 TSNQ15631 228 aaKnown RBP11.58□□□□□ -0.56
SRP54-206ENST00000555317 TBR1Q16650 682 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 DEFB109BQ30KR1 87 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 NKAIN1Q4KMZ8 207 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 MLIPQ5VWP3 458 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 FAM198BQ6UWH4 519 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 LCTLQ6UWM7 567 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 SBSNQ6UWP8 590 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 TMEM207Q6UWW9 146 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 LRRC56Q8IYG6 542 aaPredicted RBP11.58□□□□□ -0.56
SRP54-206ENST00000555317 CSNK1A1LQ8N752 337 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 ANKRD49Q8WVL7 239 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 SLC39A7Q92504 469 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 WBP1Q96G27 269 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 PRAP1Q96NZ9 151 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 GBP5Q96PP8 586 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 DHRS4Q9BTZ2 278 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 UNKQ9C0B0 810 aaKnown RBP11.58□□□□□ -0.56
SRP54-206ENST00000555317 ACSS3Q9H6R3 686 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 AKIRIN1Q9H9L7 192 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms