RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 CDSNQ15517 529 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 HKDC1Q2TB90 917 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 PRTGQ2VWP7 1150 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 ABHD17BQ5VST6 288 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 PTRHD1Q6GMV3 140 aaKnown RBP12.46□□□□□ -0.41
XRCC3-212ENST00000555231 RPTNQ6XPR3 784 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 PPP1R21Q6ZMI0 780 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 NEK10Q6ZWH5 1172 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 RAB42Q8N4Z0 105 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 DNAJB8Q8NHS0 232 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 SUN3Q8TAQ9 357 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 GSDMBQ8TAX9 411 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 MMABQ96EY8 250 aaPredicted RBP12.46□□□□□ -0.41
XRCC3-212ENST00000555231 ZFYVE21Q9BQ24 234 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 TINAGQ9UJW2 476 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 CDC14AQ9UNH5 594 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 RUVBL1Q9Y265 456 aaKnown RBP12.46□□□□□ -0.41
XRCC3-212ENST00000555231 KLK4Q9Y5K2 254 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 ADGRG4Q8IZF6 3080 aa12.46□□□□□ -0.41
XRCC3-212ENST00000555231 CCDC168Q8NDH2 2452 aa12.46□□□□□ -0.42
XRCC3-212ENST00000555231 A0A1W2PQ72 361 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 TCRBV7S2A1N4TA0A589 114 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 OR2A25A4D2G3 310 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 PRMT5O14744 637 aaPredicted RBP12.45□□□□□ -0.42
XRCC3-212ENST00000555231 PRAMEF2O60811 474 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 ZNF189O75820 626 aaPredicted RBP12.45□□□□□ -0.42
XRCC3-212ENST00000555231 GAS8O95995 478 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 ESRRAP11474 423 aaPredicted RBP12.45□□□□□ -0.42
XRCC3-212ENST00000555231 ADRA1DP25100 572 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 CMPK1P30085 196 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 PPARGP37231 505 aaPredicted RBP12.45□□□□□ -0.42
XRCC3-212ENST00000555231 MAT1AQ00266 395 aaKnown RBP12.45□□□□□ -0.42
XRCC3-212ENST00000555231 ACVR1Q04771 509 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 RBPJQ06330 500 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 TSTA3Q13630 321 aaPredicted RBP12.45□□□□□ -0.42
XRCC3-212ENST00000555231 DSG2Q14126 1118 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 MTFR2Q6P444 385 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 XKRXQ6PP77 449 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 SUSD1Q6UWL2 747 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 RIPOR1Q6ZS17 1223 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 AMER3Q8N944 861 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 RNF214Q8ND24 703 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 SLC35B2Q8TB61 432 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 HMGCLL1Q8TB92 370 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 ZNF700Q9H0M5 742 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 ETNK1Q9HBU6 452 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 CATSPERZQ9NTU4 200 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 ANAPC5Q9UJX4 755 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 PACSIN2Q9UNF0 486 aaPredicted RBP12.45□□□□□ -0.42
XRCC3-212ENST00000555231 TCAF1Q9Y4C2 921 aa12.45□□□□□ -0.42
XRCC3-212ENST00000555231 HIVEP1P15822 2718 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 A0A0A6YYC8 382 aaPredicted RBP12.44□□□□□ -0.42
XRCC3-212ENST00000555231 IGHV3-20A0A0C4DH32 117 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 A8MUI8 341 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 FAM227AF5H4B4 570 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 I3L1I5 382 aaPredicted RBP12.44□□□□□ -0.42
XRCC3-212ENST00000555231 SLC19A2O60779 497 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 ANXA5P08758 320 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 CYLC1P35663 651 aaPredicted RBP12.44□□□□□ -0.42
XRCC3-212ENST00000555231 SLC26A3P40879 764 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 CASP6P55212 293 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 ZNF766Q5HY98 468 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 FCRLBQ6BAA4 426 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 LRRC8BQ6P9F7 803 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 NCCRP1Q6ZVX7 275 aaPredicted RBP12.44□□□□□ -0.42
XRCC3-212ENST00000555231 PRUNE1Q86TP1 453 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 ZC3H7AQ8IWR0 971 aaKnown RBP12.44□□□□□ -0.42
XRCC3-212ENST00000555231 CCDC170Q8IYT3 715 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 SHISA5Q8N114 240 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 CSNK1A1LQ8N752 337 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 MTFMTQ96DP5 389 aaKnown RBP12.44□□□□□ -0.42
XRCC3-212ENST00000555231 IMMP1LQ96LU5 166 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 PANX3Q96QZ0 392 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 RNF32Q9H0A6 362 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 TSPAN10Q9H1Z9 355 aaPredicted RBP12.44□□□□□ -0.42
XRCC3-212ENST00000555231 MKKSQ9NPJ1 570 aaPredicted RBP12.44□□□□□ -0.42
XRCC3-212ENST00000555231 C14orf105Q9NVL8 296 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 STMN3Q9NZ72 180 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 MKL2Q9ULH7 1088 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 RIMKLBQ9ULI2 386 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 CELSR1Q9NYQ6 3014 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 GTF3C1Q12789 2109 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 SCN3AQ9NY46 2000 aa12.44□□□□□ -0.42
XRCC3-212ENST00000555231 LOC102723996A0A087X1L8 192 aa12.43□□□□□ -0.42
XRCC3-212ENST00000555231 GRID2IPA4D2P6 1211 aa12.43□□□□□ -0.42
XRCC3-212ENST00000555231 CD3EAPO15446 510 aaKnown RBP12.43□□□□□ -0.42
XRCC3-212ENST00000555231 PRPF4O43172 522 aaKnown RBP eCLIP12.43□□□□□ -0.422e-9■■■■■ 39.8
XRCC3-212ENST00000555231 ZNHIT1O43257 154 aa12.43□□□□□ -0.42
XRCC3-212ENST00000555231 FOXS1O43638 330 aa12.43□□□□□ -0.42
XRCC3-212ENST00000555231 VPS26AO75436 327 aa12.43□□□□□ -0.42
XRCC3-212ENST00000555231 SEC24DO94855 1032 aaPredicted RBP12.43□□□□□ -0.42
XRCC3-212ENST00000555231 STATHP02808 62 aa12.43□□□□□ -0.42
XRCC3-212ENST00000555231 KIR3DL1P43629 444 aa12.43□□□□□ -0.42
XRCC3-212ENST00000555231 EIF3BP55884 814 aaKnown RBP12.43□□□□□ -0.42
XRCC3-212ENST00000555231 SNRPNP63162 240 aaKnown RBP12.43□□□□□ -0.42
XRCC3-212ENST00000555231 KLF1Q13351 362 aaPredicted RBP12.43□□□□□ -0.42
XRCC3-212ENST00000555231 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.43□□□□□ -0.42
XRCC3-212ENST00000555231 AARS2Q5JTZ9 985 aaKnown RBP12.43□□□□□ -0.42
XRCC3-212ENST00000555231 TMEM205Q6UW68 189 aa12.43□□□□□ -0.42
XRCC3-212ENST00000555231 LANCL3Q6ZV70 420 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms