RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 KIF1CO43896 1103 aaKnown RBP10.38□□□□□ -0.75
TDP1-211ENST00000555178 DIAPH2O60879 1101 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 ATP6AP2O75787 350 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 OTCP00480 354 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 CHRM5P08912 532 aaPredicted RBP10.38□□□□□ -0.75
TDP1-211ENST00000555178 PVRP15151 417 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 EPHA3P29320 983 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 ALDH4A1P30038 563 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 CLDN6P56747 220 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 CHIT1Q13231 466 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 CPSF6Q16630 551 aaKnown RBP eCLIP10.38□□□□□ -0.75
TDP1-211ENST00000555178 PROX2Q3B8N5 592 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 PRAMEF13Q5VWM6 474 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 MILR1Q7Z6M3 343 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 SLC9B2Q86UD5 537 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 AMIGO1Q86WK6 493 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 KLHDC8AQ8IYD2 350 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 ZNF740Q8NDX6 193 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 OR2A1Q8NGT9 310 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 TWIST2Q8WVJ9 160 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 MIPEPQ99797 713 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 TWSG1Q9GZX9 223 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 SPATA7Q9P0W8 599 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 POLG2Q9UHN1 485 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 LNPEPQ9UIQ6 1025 aa10.38□□□□□ -0.75
TDP1-211ENST00000555178 SCN2AQ99250 2005 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 COL5A1P20908 1838 aaPredicted RBP10.37□□□□□ -0.75
TDP1-211ENST00000555178 OR5K4A6NMS3 321 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 CLGNO14967 610 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 PIP5K1BO14986 540 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 HDAC3O15379 428 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 CRCPO75575 148 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 CDH1P12830 882 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 ALOX15P16050 662 aaPredicted RBP10.37□□□□□ -0.75
TDP1-211ENST00000555178 CSF2RBP32927 897 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 IDH3AP50213 366 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 ARFIP2P53365 341 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 GFERP55789 205 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 DOC2AQ14183 400 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 XKR6Q5GH73 641 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 KIAA1614Q5VZ46 1190 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 ZCCHC8Q6NZY4 707 aaKnown RBP10.37□□□□□ -0.75
TDP1-211ENST00000555178 USP53Q70EK8 1073 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 OR2L8Q8NGY9 312 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 SETD7Q8WTS6 366 aaKnown RBP10.37□□□□□ -0.75
TDP1-211ENST00000555178 GRAMD1AQ96CP6 724 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 MTFMTQ96DP5 389 aaKnown RBP10.37□□□□□ -0.75
TDP1-211ENST00000555178 SRMSQ9H3Y6 488 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 ATXN7L1Q9ULK2 861 aaPredicted RBP10.37□□□□□ -0.75
TDP1-211ENST00000555178 KCNE1BA0A087WTH5 132 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 HCRTR1O43613 425 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 DFNA5O60443 496 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 WFS1O76024 890 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 LINC00032P0C843 101 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 NEK2P51955 445 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 PKNOX1P55347 436 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 TUBB3Q13509 450 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 ARHGAP19Q14CB8 494 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 ABRAXAS2Q15018 415 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 AMZ1Q400G9 498 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 SGO1Q5FBB7 561 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 METTL2BQ6P1Q9 378 aaKnown RBP10.37□□□□□ -0.75
TDP1-211ENST00000555178 EPGNQ6UW88 154 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 PLD3Q8IV08 490 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 DDIASQ8IXT1 998 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 CLYBLQ8N0X4 340 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 SDR16C5Q8N3Y7 309 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 METTL6Q8TCB7 284 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 SH3KBP1Q96B97 665 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 OR2A14Q96R47 310 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 NTMT1Q9BV86 223 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 SLC6A20Q9NP91 592 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 HRASLS2Q9NWW9 162 aa10.37□□□□□ -0.75
TDP1-211ENST00000555178 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.37□□□□□ -0.75
TDP1-211ENST00000555178 A0A1W2PQM1 296 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 PROB1E7EW31 1015 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 SDHDO14521 159 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 GIPC1O14908 333 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 CLDN9O95484 217 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 STATHP02808 62 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 CTSBP07858 339 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 FGF4P08620 206 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 HGFP14210 728 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 SNRPNP63162 240 aaKnown RBP10.36□□□□□ -0.75
TDP1-211ENST00000555178 IRF8Q02556 426 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 AASDHQ4L235 1098 aaPredicted RBP10.36□□□□□ -0.75
TDP1-211ENST00000555178 TMEM198Q66K66 360 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 SLCO4C1Q6ZQN7 724 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 EFL1Q7Z2Z2 1120 aaKnown RBP10.36□□□□□ -0.75
TDP1-211ENST00000555178 CACNA2D3Q8IZS8 1091 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 CCDC197Q8NCU1 140 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 OR2T11Q8NH01 316 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 RHBDD1Q8TEB9 315 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 SLC5A11Q8WWX8 675 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 SMPDL3AQ92484 453 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 C19orf60Q96EN9 201 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 MARK4Q96L34 752 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 FCRL4Q96PJ5 515 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 SLC38A3Q99624 504 aa10.36□□□□□ -0.75
TDP1-211ENST00000555178 ABCG4Q9H172 646 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms