RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 MSRB3Q8IXL7 192 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 FAM217AQ8IXS0 508 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 OR4A15Q8NGL6 344 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 HDAC2Q92769 488 aaKnown RBP11.52□□□□□ -0.57
XRCC3-208ENST00000554811 TMEM159Q96B96 161 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 IL4I1Q96RQ9 567 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 KCNS3Q9BQ31 491 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 COPS4Q9BT78 406 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 SLC32A1Q9H598 525 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 ZBTB20Q9HC78 741 aaPredicted RBP11.52□□□□□ -0.57
XRCC3-208ENST00000554811 KCTD5Q9NXV2 234 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 LHX3Q9UBR4 397 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 MOSPD1Q9UJG1 213 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 EFCAB9A8MZ26 197 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 UPK1AO00322 258 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 CYP2A7P20853 494 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 ACRV1P26436 265 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 S100A5P33763 92 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 MXD1Q05195 221 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 NOXRED1Q6NXP6 359 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.51□□□□□ -0.57
XRCC3-208ENST00000554811 USP45Q70EL2 814 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 OR8J3Q8NGG0 315 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 ABHD8Q96I13 439 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF641Q96N77 438 aaPredicted RBP11.51□□□□□ -0.57
XRCC3-208ENST00000554811 FZD4Q9ULV1 537 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 CAB39Q9Y376 341 aaPredicted RBP11.51□□□□□ -0.57
XRCC3-208ENST00000554811 FAM92AA1XBS5 289 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 TMEM88BA6NKF7 163 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 H3BN98 237 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 TFECO14948 347 aaPredicted RBP11.51□□□□□ -0.57
XRCC3-208ENST00000554811 SUV39H1O43463 412 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 URODP06132 367 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 SELPP16109 830 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 LMAN2Q12907 356 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 CCDC85BQ15834 202 aaPredicted RBP11.51□□□□□ -0.57
XRCC3-208ENST00000554811 COQ5Q5HYK3 327 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 FRG2Q64ET8 278 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 XAF1Q6GPH4 301 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 Q6ZNX1 250 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 CHST14Q8NCH0 376 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 VANGL1Q8TAA9 524 aaPredicted RBP11.51□□□□□ -0.57
XRCC3-208ENST00000554811 CAPSLQ8WWF8 208 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 FRG2BQ96QU4 278 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 P2RY13Q9BPV8 354 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 KAT8Q9H7Z6 458 aaKnown RBP11.51□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF556Q9HAH1 456 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 TRIM39Q9HCM9 518 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 SLC52A3Q9NQ40 469 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 DNAJC11Q9NVH1 559 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 SAMD4AQ9UPU9 718 aaKnown RBP11.51□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF236Q9UL36 1845 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 ATG2BQ96BY7 2078 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 KRBA1A5PL33 1030 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 A8MV72 311 aaPredicted RBP11.51□□□□□ -0.57
XRCC3-208ENST00000554811 AIREO43918 545 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 SOX14O95416 240 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 VNN2O95498 520 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 TMBIM6P55061 237 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 RPS26P62854 115 aaKnown RBP11.51□□□□□ -0.57
XRCC3-208ENST00000554811 CREMQ03060 361 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 ACOX1Q15067 660 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 RIMKLAQ8IXN7 391 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 VPS37AQ8NEZ2 397 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 DUS3LQ96G46 650 aaKnown RBP11.51□□□□□ -0.57
XRCC3-208ENST00000554811 B4GALT6Q9UBX8 382 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 PPT2Q9UMR5 302 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 OARD1Q9Y530 152 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 CFAP20Q9Y6A4 193 aaKnown RBP11.51□□□□□ -0.57
XRCC3-208ENST00000554811 DOCK6Q96HP0 2047 aa11.51□□□□□ -0.57
XRCC3-208ENST00000554811 A0A1W2PQ45 241 aaPredicted RBP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 A0A1W2PQY0 241 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 INPPL1O15357 1258 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 APOL3O95236 402 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 CR2P20023 1033 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 NSG1P42857 185 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 GP2P55259 537 aaKnown RBP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 RPP38P78345 283 aaKnown RBP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 HTRA3P83110 453 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 PCBP2Q15366 365 aaKnown RBP eCLIP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 CCSMST1Q4G0I0 132 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 RUNDC3AQ59EK9 446 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 DGKKQ5KSL6 1271 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 GPRC6AQ5T6X5 926 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 CPTPQ5TA50 214 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 DPY19L3Q6ZPD9 716 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 B3GNT8Q7Z7M8 397 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 NPAS4Q8IUM7 802 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 SVOPLQ8N434 492 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 TSPEARQ8WU66 669 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 YIPF2Q9BWQ6 316 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 OR51B5Q9H339 312 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 TPT1P8Q9HAU6 139 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 C11orf16Q9NQ32 467 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 DCAF13Q9NV06 445 aaKnown RBP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 ATAD3AQ9NVI7 634 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF12P17014 697 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 GSTM2P28161 218 aa11.5□□□□□ -0.57
XRCC3-208ENST00000554811 BTG3Q14201 252 aaPredicted RBP11.5□□□□□ -0.57
XRCC3-208ENST00000554811 CLCA4Q14CN2 919 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms