RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 SEMA5BQ9P283 1151 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 ZFP69BQ9UJL9 534 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 DCTN4Q9UJW0 460 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 RARRES3Q9UL19 164 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 CORO1CQ9ULV4 474 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-214ENST00000554604 ACOT9Q9Y305 439 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 PRSS21Q9Y6M0 314 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 A0A0G2JND7 137 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 LOC101059948A0A1B0GTJ6 334 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 G3V2L1 256 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 MAP3K7O43318 606 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 OR1I1O60431 355 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 CCNYL3P0C7X3 344 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 EBLN1P0CF75 366 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 MYL2P10916 166 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 FGF5P12034 268 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 FOLR1P15328 257 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 ZNF28P17035 718 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 OGNP20774 298 aaKnown RBP12.02□□□□□ -0.49
SHMT2-214ENST00000554604 CDH3P22223 829 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 STAT5AP42229 794 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 SLC1A6P48664 564 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 IRF9Q00978 393 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 PLOD1Q02809 727 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-214ENST00000554604 PRKG2Q13237 762 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 MAP7Q14244 749 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.02□□□□□ -0.49
SHMT2-214ENST00000554604 ZNF658BQ4V348 819 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-214ENST00000554604 TMTC4Q5T4D3 741 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 ZYG11AQ6WRX3 759 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 ASRGL1Q7L266 308 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 BPHLQ86WA6 291 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-214ENST00000554604 CILP2Q8IUL8 1156 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 C10orf107Q8IVU9 208 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 CARFQ8N187 725 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 TSPAN17Q96FV3 270 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 SLC45A3Q96JT2 553 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 SEMA4CQ9C0C4 833 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 C20orf27Q9GZN8 174 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 FGF21Q9NSA1 209 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 CATSPERZQ9NTU4 200 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 ZNF358Q9NW07 568 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 HEY2Q9UBP5 337 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 PCM1Q15154 2024 aa12.02□□□□□ -0.49
SHMT2-214ENST00000554604 PHGDHO43175 533 aaKnown RBP12.01□□□□□ -0.49
SHMT2-214ENST00000554604 TRIM13O60858 407 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 HAUS5O94927 633 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 KLHL2O95198 593 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 F7P08709 466 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-214ENST00000554604 FAM87AP0C7U9 286 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 PRKAR1AP10644 381 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 ITGB6P18564 788 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 DLSTP36957 453 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 TTPAP49638 278 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 SLC12A2P55011 1212 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 TAS2R39P59534 338 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 ABCE1P61221 599 aaKnown RBP12.01□□□□□ -0.49
SHMT2-214ENST00000554604 MC1RQ01726 317 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 TBR1Q16650 682 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 LRRC8EQ6NSJ5 796 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 BORAQ6PGQ7 559 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 NAPRTQ6XQN6 538 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 ZCCHC23Q6ZST2 131 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 CLNKQ7Z7G1 428 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 ZNF605Q86T29 641 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 MTDHQ86UE4 582 aaKnown RBP12.01□□□□□ -0.49
SHMT2-214ENST00000554604 AMIGO1Q86WK6 493 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 WDR75Q8IWA0 830 aaKnown RBP12.01□□□□□ -0.49
SHMT2-214ENST00000554604 CENPLQ8N0S6 344 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-214ENST00000554604 OR52E1Q8NGJ3 308 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 PIWIL2Q8TC59 973 aaKnown RBP12.01□□□□□ -0.49
SHMT2-214ENST00000554604 PPP4R1Q8TF05 950 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 INPP5DQ92835 1189 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 KLHL29Q96CT2 875 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 CATSPER2Q96P56 530 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 FCRL4Q96PJ5 515 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 TFB2MQ9H5Q4 396 aaKnown RBP12.01□□□□□ -0.49
SHMT2-214ENST00000554604 FANCEQ9HB96 536 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 FBXO6Q9NRD1 293 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-214ENST00000554604 C1GALT1Q9NS00 363 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 OXSMQ9NWU1 459 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 POMT2Q9UKY4 750 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 PADI1Q9ULC6 663 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 RUVBL2Q9Y230 463 aaKnown RBP12.01□□□□□ -0.49
SHMT2-214ENST00000554604 ASF1AQ9Y294 204 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 PCDHB3Q9Y5E6 796 aa12.01□□□□□ -0.49
SHMT2-214ENST00000554604 SLC9B1P1A6NJY1 282 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 TARM1B6A8C7 271 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 BTN3A1O00481 513 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 CD3EAPO15446 510 aaKnown RBP12□□□□□ -0.49
SHMT2-214ENST00000554604 ITM2AO43736 263 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 KDM1AO60341 852 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 S1PR4O95977 384 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 SFTPCP11686 197 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 NQO1P15559 274 aaKnown RBP12□□□□□ -0.49
SHMT2-214ENST00000554604 ALOX15P16050 662 aaPredicted RBP12□□□□□ -0.49
SHMT2-214ENST00000554604 TCN2P20062 427 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 PRDX3P30048 256 aaKnown RBP12□□□□□ -0.49
SHMT2-214ENST00000554604 GMPRP36959 345 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 SLC26A3P40879 764 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms