RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 SSH2Q76I76 1423 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CAMSAP1Q5T5Y3 1602 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SERTM2A0A1B0GWG4 89 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ATP5BP06576 529 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CDK2P24941 298 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 RBL1P28749 1068 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 BMXP51813 675 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 RPL6Q02878 288 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PPM1JQ5JR12 505 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ARL9Q6T311 187 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FAM83AQ86UY5 434 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CAMK1DQ8IU85 385 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PHYKPLQ8IUZ5 450 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SIDT2Q8NBJ9 832 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CDRT15Q96T59 188 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 RBM4BQ9BQ04 359 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FOLH1BQ9HBA9 442 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ALG5Q9Y673 324 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SPATA31A5Q5VU36 1347 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SPATA31A7Q8IWB4 1347 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 BIDP55957 195 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 BACE1P56817 501 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 GRB10Q13322 594 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 UBAP2LQ14157 1087 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 RGS21Q2M5E4 152 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MEDAGQ5VYS4 303 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 LIN54Q6MZP7 749 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MON1BQ7L1V2 547 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CMC1Q7Z7K0 106 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PROKR2Q8NFJ6 384 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 OR8H1Q8NGG4 311 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 RMND5BQ96G75 393 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 COPS7AQ9UBW8 275 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ABCA10Q8WWZ4 1543 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 E5RJQ4 531 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SLC1A2P43004 574 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ARPC4P59998 168 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MPP1Q00013 466 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ST3GAL4Q11206 333 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CELF3Q5SZQ8 465 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 BROXQ5VW32 411 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM64Q6YI46 380 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 C11orf24Q96F05 449 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 AIFM2Q9BRQ8 373 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ZCCHC2Q9C0B9 1178 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 AMBNQ9NP70 447 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PNPOQ9NVS9 261 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 C14orf166Q9Y224 244 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 LSM5Q9Y4Y9 91 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ZFP37Q9Y6Q3 630 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PRAG1Q86YV5 1406 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ATP10DQ9P241 1426 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ATP7BP35670 1465 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 VSTM5A8MXK1 200 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 HRGP04196 525 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SERPINF2P08697 491 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SERPINB9P50453 376 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 NR1I3Q14994 352 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 AAK1Q2M2I8 961 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SLC9B1Q4ZJI4 515 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM203Q969S6 136 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CITED2Q99967 270 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FAM126AQ9BYI3 521 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SMIM3Q9BZL3 60 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 BTBD1Q9H0C5 482 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ESRP2Q9H6T0 727 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CHST11Q9NPF2 352 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ABCG2Q9UNQ0 655 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ACOT9Q9Y305 439 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TMX2Q9Y320 296 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CENPBD1B2RD01 187 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 G3V2T6 193 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PECAM1P16284 738 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 GGT2P36268 569 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CCR10P46092 362 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 EFNA5P52803 228 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MARC1Q5VT66 337 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 VSTM1Q6UX27 236 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF296Q8WUU4 475 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PYDC1Q8WXC3 89 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 METTL2AQ96IZ6 378 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FAIM2Q9BWQ8 316 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 RXFP1Q9HBX9 757 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 E9PAM4 449 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TRAFD1O14545 582 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 RHCEP18577 417 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 IL32P24001 234 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 COILP38432 576 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 HERV-K104P61576 105 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ELF3P78545 371 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ARL16Q0P5N6 197 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF852Q6ZMS4 543 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 DNAJB8Q8NHS0 232 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 NINJ1Q92982 152 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SERPINB12Q96P63 405 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 BDH2Q9BUT1 245 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ERVK-6Q9BXR3 956 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF71Q9NQZ8 489 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PLSCR2Q9NRY7 297 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MLXQ9UH92 298 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms