RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TNIP1Q15025 636 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 C20orf194Q5TEA3 1177 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 GLRX5Q86SX6 157 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 TMEM178AQ8NBL3 297 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 OR4C3Q8NH37 302 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 HCAR2Q8TDS4 363 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 MOB3AQ96BX8 217 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 HDAC11Q96DB2 347 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 ANKRD2Q9GZV1 360 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 MMADHCQ9H3L0 296 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-211ENST00000554437 P4HTMQ9NXG6 502 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 TRIM17Q9Y577 477 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 IKBKGQ9Y6K9 419 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 DISP3Q9P2K9 1392 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 URADA6NGE7 173 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 NR5A2O00482 541 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 NDC80O14777 642 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 KLF11O14901 512 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 ZBTB14O43829 449 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 AP2A2O94973 939 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 C22orf31O95567 290 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 FAM157CP0CG43 387 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 IGHV4-31P0DP07 118 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 PCP11498 1178 aaKnown RBP4.5□□□□□ -1.69
SCFD1-211ENST00000554437 GAP43P17677 238 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 MAPK3P27361 379 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-211ENST00000554437 NKX2-1P43699 371 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-211ENST00000554437 CCR10P46092 362 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 ASCL1P50553 236 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 SNRPD1P62314 119 aaKnown RBP4.5□□□□□ -1.69
SCFD1-211ENST00000554437 YWHAHQ04917 246 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-211ENST00000554437 TAF10Q12962 218 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 CAMK2DQ13557 499 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 NFE2L1Q14494 772 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 SQLEQ14534 574 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 UGT3A2Q3SY77 523 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 MCMDC2Q4G0Z9 681 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 GLIPR1L2Q4G1C9 344 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 KRBOX4Q5JUW0 171 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 CST9LP1Q5W188 147 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 CAVIN1Q6NZI2 390 aaKnown RBP4.5□□□□□ -1.69
SCFD1-211ENST00000554437 RBPMS2Q6ZRY4 209 aaKnown RBP4.5□□□□□ -1.69
SCFD1-211ENST00000554437 XXYLT1Q8NBI6 393 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 OR2T11Q8NH01 316 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 OR52N5Q8NH56 324 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 ATP6V0A1Q93050 837 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 FEVQ99581 238 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 FUT8Q9BYC5 575 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 FGF22Q9HCT0 170 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 SH3BGRL2Q9UJC5 107 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 NAP1L2Q9ULW6 460 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-211ENST00000554437 STUB1Q9UNE7 303 aa4.5□□□□□ -1.69
SCFD1-211ENST00000554437 SYNRGQ9UMZ2 1314 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 C2orf81A6NN90 581 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 PTGESO14684 152 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 STX6O43752 255 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 STAM2O75886 525 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 DFFBO76075 338 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 ACSL3O95573 720 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 RAF1P04049 648 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 GPIP06744 558 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 EEF2P13639 858 aaKnown RBP4.49□□□□□ -1.69
SCFD1-211ENST00000554437 ZNF26P17031 533 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-211ENST00000554437 EEF1B2P24534 225 aaKnown RBP4.49□□□□□ -1.69
SCFD1-211ENST00000554437 AZGP1P25311 298 aaKnown RBP4.49□□□□□ -1.69
SCFD1-211ENST00000554437 LHX1P48742 406 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 LIMK1P53667 647 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 RBPJQ06330 500 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 ACTN3Q08043 901 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-211ENST00000554437 ACSM1Q08AH1 577 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 TUBB2AQ13885 445 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 VEZF1Q14119 521 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 MORF4L2Q15014 288 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 TEAD2Q15562 447 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 SMU1Q2TAY7 513 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 ZFP69Q49AA0 526 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 XKR3Q5GH77 459 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 TRAT1Q6PIZ9 186 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 LGI2Q8N0V4 545 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 ZNF611Q8N823 705 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 SETD6Q8TBK2 473 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 MRGPRDQ8TDS7 321 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 GMPPAQ96IJ6 420 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-211ENST00000554437 AK8Q96MA6 479 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 FAM20AQ96MK3 541 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 CFAP57Q96MR6 1250 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 RUNDC3BQ96NL0 473 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 TMEM237Q96Q45 408 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 CPNE1Q99829 537 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 TUBB2BQ9BVA1 445 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 PANK2Q9BZ23 570 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 OR2B2Q9GZK3 357 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 WDR13Q9H1Z4 485 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 TNMDQ9H2S6 317 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 CPVLQ9H3G5 476 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 THAP9Q9H5L6 903 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 FAM207AQ9NSI2 230 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms