RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 FAM124BQ9H5Z6 455 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 LRRC40Q9H9A6 602 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 GTSE1Q9NYZ3 720 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ANKFY1Q9P2R3 1169 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ATXN10Q9UBB4 475 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 AJAP1Q9UKB5 411 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CDH9Q9ULB4 789 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SCML1Q9UN30 329 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 VPS4AQ9UN37 437 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 LIPT1Q9Y234 373 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DNAJC16Q9Y2G8 782 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 HS3ST4Q9Y661 456 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ADAMTS9Q9P2N4 1935 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 UBE4BO95155 1302 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DCHS1Q96JQ0 3298 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 A0A1W2PQD8 194 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 FUOMA2VDF0 154 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TMEM210A6NLX4 147 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 KIAA1324LA8MWY0 1029 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 BTN3A1O00481 513 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CYB561D2O14569 222 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CTDSP2O14595 271 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PRRG2O14669 202 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 EIF3HO15372 352 aaKnown RBP eCLIP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SLC16A4O15374 487 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 STX10O60499 249 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 VPS4BO75351 444 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PSIP1O75475 530 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NDUFS3O75489 264 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CRCPO75575 148 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CRYZL1O95825 349 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DDAH2O95865 285 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DLGAP3O95886 979 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 F9P00740 461 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 FTLP02792 175 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PLA2G4BP0C869 781 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CD59P13987 128 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ARSAP15289 507 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 H2AFXP16104 143 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 KRT15P19012 456 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PON1P27169 355 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CASP14P31944 242 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 GRIA4P48058 902 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ENTPD1P49961 510 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NOVA1P51513 510 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NAGLUP54802 743 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CORO7P57737 925 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 HNRNPKP61978 463 aaKnown RBP eCLIP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 VAMP2P63027 116 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CAPRIN1Q14444 709 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 BTBD16Q32M84 506 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 FAM98BQ52LJ0 330 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 AARS2Q5JTZ9 985 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 EXOSC6Q5RKV6 272 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 RNLSQ5VYX0 342 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PSAPL1Q6NUJ1 521 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SHC4Q6S5L8 630 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 RAD9BQ6WBX8 426 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 RTL4Q6ZR62 310 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF551Q7Z340 670 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 KCNK18Q7Z418 384 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ADAT2Q7Z6V5 191 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NRROSQ86YC3 692 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF573Q86YE8 665 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 FMR1NBQ8N0W7 255 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SLC35F6Q8N357 371 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CEP112Q8N8E3 955 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SCAIQ8N9R8 606 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 POC5Q8NA72 575 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PDZD8Q8NEN9 1154 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 OR2T3Q8NH03 318 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CD300LFQ8TDQ1 290 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ATL1Q8WXF7 558 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 THAP4Q8WY91 577 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ELMO3Q96BJ8 720 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ALG14Q96F25 216 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 C16orf58Q96GQ5 468 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZBTB45Q96K62 511 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 C5orf34Q96MH7 638 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TSC22D3Q99576 134 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ZBTB18Q99592 522 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TMEM246Q9BRR3 403 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 LRRC1Q9BTT6 524 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 KRTAP9-3Q9BYQ3 159 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NAT10Q9H0A0 1025 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 P2RY12Q9H244 342 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 OR51B6Q9H340 312 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CUEDC2Q9H467 287 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 NOL11Q9H8H0 719 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SP110Q9HB58 689 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 OLFML3Q9NRN5 406 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SIRT3Q9NTG7 399 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 RIC8BQ9NVN3 520 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DUS2Q9NX74 493 aaKnown RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 DPP3Q9NY33 737 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TAS2R10Q9NYW0 307 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 RCOR3Q9P2K3 495 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-206ENST00000554429 TRPC4Q9UBN4 977 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 KLHL3Q9UH77 587 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 GPN3Q9UHW5 284 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms