RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 SLAMF7Q9NQ25 335 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 SLCO1C1Q9NYB5 712 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 LEF1Q9UJU2 399 aaPredicted RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 ABCG2Q9UNQ0 655 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 NEUROG3Q9Y4Z2 214 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 MAB21L2Q9Y586 359 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 ANK1P16157 1881 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 TMEM150BA6NC51 233 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 RRN3P2A6NIE6 340 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 HNRNPCL2B2RXH8 293 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 CA12O43570 354 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 IPO13O94829 963 aaKnown RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 APOL3O95236 402 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 ARP10275 920 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 ZNF37AP17032 561 aaPredicted RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 HK1P19367 917 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 GPD1P21695 349 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 CYP2F1P24903 491 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 RPS19P39019 145 aaKnown RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 RAB10P61026 200 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 CSNK2BP67870 215 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 PLIN5Q00G26 463 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 HSF2Q03933 536 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 CSTF1Q05048 431 aaKnown RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 FAM83EQ2M2I3 478 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 RTP2Q5QGT7 225 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 JADE1Q6IE81 842 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 RGS7BPQ6MZT1 257 aaPredicted RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 SHQ1Q6PI26 577 aaKnown RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 FAM92BQ6ZTR7 304 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 DCBLD1Q8N8Z6 715 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 RDM1Q8NG50 284 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 OR52K1Q8NGK4 314 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 HTR3CQ8WXA8 447 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 RAD51AP1Q96B01 352 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 ZBED6CLQ96FA7 236 aaPredicted RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 SLC4A9Q96Q91 983 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 GFM1Q96RP9 751 aaKnown RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 ZNF251Q9BRH9 671 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 SNRNP25Q9BV90 132 aaKnown RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 OLA1Q9NTK5 396 aaKnown RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 PLCXD1Q9NUJ7 323 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 ERAP1Q9NZ08 941 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 NLKQ9UBE8 527 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 NDRG3Q9UGV2 375 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 PURGQ9UJV8 347 aaKnown RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 SLC45A1Q9Y2W3 748 aa9.29□□□□□ -0.92
SIX4-202ENST00000554079 MRPL11Q9Y3B7 192 aaKnown RBP9.29□□□□□ -0.92
SIX4-202ENST00000554079 IQCMA0A1B0GVH7 501 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 UBA6A0AVT1 1052 aaPredicted RBP9.28□□□□□ -0.92
SIX4-202ENST00000554079 C2CD4BA6NLJ0 364 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 ORC5O43913 435 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 HCN1O60741 890 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 HPGDSO60760 199 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 MMP20O60882 483 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 PSAPP07602 524 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 FGF2P09038 288 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 ACAA1P09110 424 aaPredicted RBP9.28□□□□□ -0.92
SIX4-202ENST00000554079 PDGFRAP16234 1089 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 EPHA2P29317 976 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 HERVK_113P63132 956 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 GPR17Q13304 367 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 PLD1Q13393 1074 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 HFEQ30201 348 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 ANKRD39Q53RE8 183 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 LRRC66Q68CR7 880 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 NADSYN1Q6IA69 706 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 TMEM107Q6UX40 140 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 SIAH1Q8IUQ4 282 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 ENTHD1Q8IYW4 607 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 STX19Q8N4C7 294 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 TTC29Q8NA56 475 aaPredicted RBP9.28□□□□□ -0.92
SIX4-202ENST00000554079 OR6C4Q8NGE1 309 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 SETD7Q8WTS6 366 aaKnown RBP9.28□□□□□ -0.92
SIX4-202ENST00000554079 PMM1Q92871 262 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 MRPL48Q96GC5 212 aaKnown RBP9.28□□□□□ -0.92
SIX4-202ENST00000554079 TOX2Q96NM4 488 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 MNTQ99583 582 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 DPH7Q9BTV6 452 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 ASPNQ9BXN1 380 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 MCOLN1Q9GZU1 580 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 ABCG4Q9H172 646 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 C8orf33Q9H7E9 229 aaPredicted RBP9.28□□□□□ -0.92
SIX4-202ENST00000554079 RASSF1Q9NS23 344 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 CISHQ9NSE2 258 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 TMOD3Q9NYL9 352 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 NDRG2Q9UN36 371 aaKnown RBP9.28□□□□□ -0.92
SIX4-202ENST00000554079 MGAT4BQ9UQ53 548 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 ERVK-19Q9WJR5 959 aa9.28□□□□□ -0.92
SIX4-202ENST00000554079 C17orf113A0A1B0GUU1 675 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 LGALS8O00214 317 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 PIP5K1BO14986 540 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 SGCEO43556 437 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 C9P02748 559 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 SLC10A3P09131 477 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 LBPP18428 481 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 LHCGRP22888 699 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 PTAFRP25105 342 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 SSTR2P30874 369 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 GSTM5P46439 218 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms