RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 C2orf49Q9BVC5 232 aaPredicted RBP6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 DUSP21Q9H596 190 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 ATP13A3Q9H7F0 1226 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 IL1RAPQ9NPH3 570 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 RASSF1Q9NS23 344 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZDHHC3Q9NYG2 299 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 PDP1Q9P0J1 537 aaPredicted RBP6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 KIAA1522Q9P206 1035 aaPredicted RBP6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 B3GNT3Q9Y2A9 372 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 ORC6Q9Y5N6 252 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 BACE2Q9Y5Z0 518 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 DOCK6Q96HP0 2047 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 PLXNA2O75051 1894 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 KRBA1A5PL33 1030 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 CLDN25C9JDP6 229 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 M0QX08 132 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 CLIC1O00299 241 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 SOCS5O75159 536 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 WBP4O75554 376 aaKnown RBP6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 CCNDBP1O95273 360 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 IGSF6O95976 241 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 LCKP06239 509 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 PRPS2P11908 318 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 JUNDP17535 347 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 CDH3P22223 829 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 PRPH2P23942 346 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 TPP2P29144 1249 aaPredicted RBP6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 AQP1P29972 269 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 TGFBR2P37173 567 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 KIR3DL1P43629 444 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 PTSQ03393 145 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 MTAPQ13126 283 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 IL18R1Q13478 541 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 GAB1Q13480 694 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 DDX39BQ13838 428 aaKnown RBP6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 CLCA4Q14CN2 919 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 MAD2L1BPQ15013 274 aaPredicted RBP6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 OXA1LQ15070 435 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 VMACQ2NL98 169 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 GPR33Q49SQ1 333 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 IQCCQ4KMZ1 466 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 CATSPEREQ5SY80 951 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZNF648Q5T619 568 aaPredicted RBP6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 LHX8Q68G74 356 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 PDE12Q6L8Q7 609 aaKnown RBP6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 KIAA1841Q6NSI8 718 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 FKBP9P1Q75LS8 142 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 L3MBTL4Q8NA19 623 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZNF461Q8TAF7 563 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 MYLIPQ8WY64 445 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 RORBQ92753 470 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 GLMNQ92990 594 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 TAMM41Q96BW9 452 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 PANX1Q96RD7 426 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 COPS8Q99627 209 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 MRPL9Q9BYD2 267 aaKnown RBP6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 RMND5AQ9H871 391 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 IL21Q9HBE4 155 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 TM9SF3Q9HD45 589 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 AASDHPPTQ9NRN7 309 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 DAPK2Q9UIK4 370 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 SAMD4AQ9UPU9 718 aaKnown RBP6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 PCDHGB1Q9Y5G3 927 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 GMPPBQ9Y5P6 360 aa6.72□□□□□ -1.33
LINC-ROR-201ENST00000553704 IGLV3-16A0A075B6K0 115 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 TMEM202A6NGA9 273 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 TMEM229AB2RXF0 380 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 E7EQ34 232 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 PCDHGA12O60330 932 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 FAM20BO75063 409 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 NADKO95544 446 aaPredicted RBP6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 ETHE1O95571 254 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 CPSF4O95639 269 aaKnown RBP6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 FABP3P05413 133 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 SRCP12931 536 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 FUT4P22083 530 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 HALP42357 657 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 TM4SF4P48230 202 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 PFN3P60673 137 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 CREMQ03060 361 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 KEAP1Q14145 624 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZNF846Q147U1 533 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 ACOX1Q15067 660 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 DUOXA1Q1HG43 343 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 RFX4Q33E94 735 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 CCSMST1Q4G0I0 132 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 PRSS36Q5K4E3 855 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 LYPLAL1Q5VWZ2 237 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 FRG2Q64ET8 278 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 RETSATQ6NUM9 610 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 METTL2BQ6P1Q9 378 aaKnown RBP6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 TSEN54Q7Z6J9 526 aaKnown RBP6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 SERPINA11Q86U17 422 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 SYT12Q8IV01 421 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 FAM217AQ8IXS0 508 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 CBARPQ8N350 705 aaPredicted RBP6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 TTC29Q8NA56 475 aaPredicted RBP6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 OR2AP1Q8NGE2 309 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms